Of 209 facilities listed, the water type is known for 114. Facilities with unknown water type are still listed.
| Hyogo | Kinki | Kin no Yu (Gold Bath) Editor's Pick A communal bathhouse run by the city of Kobe. The iconic outer bath of Arima Onsen, where visitors can easily enjoy the reddish-brown 'gold spring' water. | Chloride Spring Iron-bearing sodium – strong chloride spring | 73,619/yr |
| Hyogo | Kinki | Gin no Yu (Silver Bath) Editor's Pick Also run by the city of Kobe, this communal bathhouse offers the clear, colorless 'silver spring' (a carbonated, radium-bearing spring). | Radium Spring Radon spring (carbonated spring) | 73,619/yr |
| Fukushima | Tohoku | Spa Resort Hawaiians | Unknown | 73,532/yr |
| Tokyo | Kanto | Hanakei no Yu | Unknown | 72,143/yr |
| Yamanashi | Chubu | Fujiyama Onsen | Unknown | 62,746/yr |
| Tokyo | Kanto | Kur Garden (Tama Tech) | Unknown | 58,403/yr |
| Aomori | Tohoku | Sukayu Onsen Hiba Senninburo Editor's Pick Famous for its huge mixed-bathing hall built entirely of Hiba cypress; a renowned hot spring of the Hakkoda mountains open for day bathing, and Japan's first-designated National Health Resort. | Sulfur Spring Acidic, sulfur-bearing aluminum/iron(II) – sulfate/chloride spring | 46,295/yr |
| Aomori | Tohoku | Sukayu | Sulfur Spring Acidic sulfur spring | 46,295/yr |
| Gifu | Chubu | Gero Onsen Shirasagi no Yu Editor's Pick A town-run communal bathhouse named for the White Heron legend, symbolic of Gero Onsen. | Simple Thermal Spring Alkaline simple spring | 42,197/yr |
| Akita | Tohoku | Tamagawa Onsen Grand Bath Editor's Pick Known for its strongly acidic water at around pH 1.2, one of the most acidic in Japan, drawing therapeutic bathers ('toji') from across the country; day bathing available. | Chloride Spring Acidic, iron(II)-bearing aluminum – sulfate/chloride spring | 34,997/yr |
| Kanagawa | Kanto | Lake Sagami MORI MORI | Unknown | 30,555/yr |
| Tottori | Chugoku | Misasa Onsen Kawara-buro Editor's Pick A free open-air bath on the riverbank of the Mitoku River, symbolic of Misasa Onsen, known for having some of the highest radon content in the world. | Radium Spring Radioactive spring (radon spring) | 26,558/yr |
| Kanagawa | Kanto | Yunessun | Unknown | 21,385/yr |
| Miyagi | Tohoku | Waseda Sajikiyu Editor's Pick A day-use bathing facility representative of the Naruko Onsen area, built after research into the local spring sources conducted by Waseda University students. | Sulfur Spring Sulfur-bearing sodium – sulfate/chloride spring | 18,941/yr |
| Hiroshima | Chugoku | Miroku no Sato | Unknown | 18,442/yr |
| Iwate | Tohoku | Hotto Yuda | Unknown | 18,093/yr |
| Saga | Kyushu & Okinawa | Siebold no Yu Editor's Pick The symbolic town-run communal bathhouse of Ureshino Onsen, known for its silky 'beautiful-skin' water. | Simple Thermal Spring Alkaline simple spring | 17,775/yr |
| Yamagata | Tohoku | Zao Onsen Grand Open-Air Bath Editor's Pick An open-air bath formed by damming a river, with a strongly acidic water known for a nearly 1,900-year history since the hot spring's founding. | Sulfur Spring Acidic, sulfur-bearing sulfate/chloride spring | 17,062/yr |
| Shizuoka | Chubu | Yamada-yu Editor's Pick A neighborhood public bathhouse using spring water from Atami Onsen, well loved by locals. | Chloride Spring Sodium – chloride spring | 16,974/yr |
| Ishikawa | Chubu | Soyu Editor's Pick The communal bathhouse at the heart of Yamashiro Onsen, symbolic of this historic hot spring representative of the Hokuriku region. | Simple Thermal Spring Alkaline simple spring | 16,694/yr |
| Kyoto | Kinki | Kasagi Onsen | Unknown | 15,892/yr |
| Ehime | Shikoku | Dogo Onsen Honkan Editor's Pick The symbolic wooden communal bathhouse of Dogo Onsen, whose history spans 3,000 years and which is associated with Natsume Soseki (an Important Cultural Property of Japan). | Simple Thermal Spring Alkaline simple spring | 14,990/yr |
| Tokyo | Kanto | Spa LaQua | Unknown | 11,137/yr |
| Tokyo | Kanto | LaQua | Unknown | 11,137/yr |
| Nagano | Chubu | Katakurakan | Unknown | 11,014/yr |
| Okayama | Chugoku | Sunayu Editor's Pick A free mixed-bathing open-air bath welling up on the riverbank of the Asahi River, one of the finest in western Japan and symbolic of Yubara Onsen. | Simple Thermal Spring Simple spring | 10,837/yr |
| Yamanashi | Chubu | Hottarakashi Onsen | Simple Thermal Spring Simple spring | 10,703/yr |
| Mie | Kinki | Yuami no Shima | Unknown | 10,538/yr |
| Tochigi | Kanto | Shiobara Onsen Villages | Sulfur Spring Sulfur, acidic, sulfate, chloride, bicarbonate and simple springs | 10,416/yr |
| Kagoshima | Kyushu & Okinawa | Sunamushi Kaikan Sarakku Editor's Pick A facility symbolic of Ibusuki Onsen, offering the rare natural sand-steam bath experience found almost nowhere else in the world. | Chloride Spring Sodium – chloride spring | 10,406/yr |
| Tochigi | Kanto | Shika no Yu Editor's Pick A communal bathhouse with over 1,300 years of history, the birthplace of Nasu Onsen, lined with several baths of differing temperatures. | Sulfur Spring Sulfur-bearing calcium/sodium – sulfate/chloride spring | 8,417/yr |
| Chiba | Kanto | Oedo Onsen Monogatari Urayasu Mangekyo | Unknown | 7,478/yr |
| Chiba | Kanto | Yumeguri Mangekyo | Unknown | 7,478/yr |
| Tokyo | Kanto | Toshimaen Niwa no Yu | Chloride Spring Sodium – strong chloride spring | 7,194/yr |
| Akita | Tohoku | Quince Moriyoshi | Unknown | 6,804/yr |
| Hyogo | Kinki | Taiko no Yu | Unknown | 6,299/yr |
| Tokyo | Kanto | Thermae-yu | Unknown | 5,995/yr |
| Kanagawa | Kanto | Nanasawa Onsen | Simple Thermal Spring Simple spring | 5,933/yr |
| Oita | Kyushu & Okinawa | Keirin Onsen | Unknown | 5,451/yr |
| Oita | Kyushu & Okinawa | Takegawara Onsen Editor's Pick Founded in 1879, the city-run communal bathhouse representative of Beppu Onsen, also famous for its sand-bath treatments. | Unknown | 5,063/yr |
| Tokyo | Kanto | Keio Takaosan Onsen | Simple Thermal Spring Alkaline simple spring | 4,868/yr |
| Ehime | Shikoku | Kisuke Box | Unknown | 4,687/yr |
| Hokkaido | Hokkaido | Nagareyama Onsen | Sulfate Spring Sodium/calcium – sulfate spring | 4,674/yr |
| Niigata | Chubu | Niitsu Onsen | Chloride Spring Iodine-bearing sodium – chloride/bicarbonate spring | 4,651/yr |
| Shiga | Kinki | Agaryanse | Unknown | 4,518/yr |
| Kanagawa | Kanto | Iiyama Onsen | Simple Thermal Spring Simple spring | 4,028/yr |
| Gunma | Kanto | Usui Pass Forest Park Exchange Hall 'Toge no Yu' | Chloride Spring Sodium – bicarbonate/chloride spring | 3,899/yr |
| Yamagata | Tohoku | Dohmeki Onsen | Chloride Spring Sodium strong chloride spring | 3,725/yr |
| Fukui | Chubu | Tsuruga Kirameki Onsen Rela Port | Unknown | 3,611/yr |
| Hyogo | Kinki | Nature Spa Takarazuka | Unknown | 3,462/yr |
| Aichi | Chubu | Yukichiro | Simple Thermal Spring Weakly alkaline simple spring | 3,317/yr |
| Tokyo | Kanto | Kabe Onsen | Unknown | 3,168/yr |
| Shimane | Chugoku | Izumo Iris no Oka | Unknown | 3,104/yr |
| Nagano | Chubu | Hakuba Happo Onsen | Simple Thermal Spring Alkaline simple spring | 3,097/yr |
| Kumamoto | Kyushu & Okinawa | Yurakkusu | Unknown | 2,946/yr |
| Miyagi | Tohoku | Onagawa Onsen Yupoppo | Other Hypotonic alkaline spring | 2,941/yr |
| Tokyo | Kanto | Akigawa Valley Seotonoyu | Unknown | 2,677/yr |
| Tokyo | Kanto | Spagium Japon | Chloride Spring Sodium – chloride/bicarbonate spring | 2,597/yr |
| Saitama | Kanto | Onsen Balcony King & Queen | Unknown | 2,597/yr |
| Saitama | Kanto | Saitama Seikanji Onsen | Chloride Spring Chloride spring | 2,590/yr |
| Saitama | Kanto | Hanawaraku no Yu | Unknown | 2,437/yr |
| Akita | Tohoku | Hachimori Isaribi Onsen Hatahata-kan | Unknown | 2,422/yr |
| Yamanashi | Chubu | Yoshinoike Onsen | Simple Thermal Spring Simple spring | 2,399/yr |
| Kanagawa | Kanto | Kabutoyu Onsen Sansuiro | Unknown | 2,355/yr |
| Gifu | Chubu | Nakatsugawa Onsen Kur Resort Yufunesawa | Bicarbonate Spring Sodium bicarbonate spring (baking-soda spring) | 2,320/yr |
| Hiroshima | Chugoku | Kagura Monzen Tojimura | Unknown | 2,252/yr |
| Tochigi | Kanto | Oyama Omoigawa Onsen | Unknown | 2,230/yr |
| Oita | Kyushu & Okinawa | Hamawaki Onsen | Unknown | 2,217/yr |
| Ishikawa | Chubu | Bird Humming Torigoe | Unknown | 2,156/yr |
| Ishikawa | Chubu | Tedori Onsen | Unknown | 2,156/yr |
| Oita | Kyushu & Okinawa | Beppu Kaihin Sunayu (Beach Sand Bath) | Unknown | 2,112/yr |
| Ibaraki | Kanto | Tsukuba Wellness Park | Unknown | 2,080/yr |
| Kanagawa | Kanto | Manten no Yu (Yokohama) A mineral spring meeting the standards of Japan's Hot Spring Act. | Other (Mineral spring meeting the Hot Springs Act standard) | 2,075/yr |
| Nagano | Chubu | Azumino Shakunage no Yu | Simple Thermal Spring Simple spring | 2,060/yr |
| Kumamoto | Kyushu & Okinawa | Sakura-yu | Unknown | 2,052/yr |
| Yamagata | Tohoku | Ringo Onsen (Apple Onsen) | Chloride Spring Sodium – strong chloride spring | 2,046/yr |
| Shizuoka | Chubu | Marine Spa Atami | Unknown | 2,030/yr |
| Hyogo | Kinki | Nada Onsen | Chloride Spring Sodium – bicarbonate/chloride low-temperature spring | 2,015/yr |
| Toyama | Chubu | Funahashi Tateyama Natural Hot Spring Yumegokochi | Chloride Spring Sodium strong chloride spring | 2,000/yr |
| Fukushima | Tohoku | Koriyama Yuraxx Atami | Unknown | 1,989/yr |
| Saga | Kyushu & Okinawa | Takeo Onsen Shinkan | Unknown | 1,959/yr |
| Chiba | Kanto | Clean Spa Ichikawa | Unknown | 1,907/yr |
| Hokkaido | Hokkaido | Eniwa no Yu | Unknown | 1,899/yr |
| Hokkaido | Hokkaido | Eniwa Onsen La Foret | Unknown | 1,899/yr |
| Saitama | Kanto | Sawarabi no Yu | Simple Thermal Spring Alkaline simple spring | 1,862/yr |
| Tokyo | Kanto | Murayama Onsen Katakuri no Yu | Unknown | 1,819/yr |
| Shizuoka | Chubu | Hanasaki no Yu | Unknown | 1,777/yr |
| Hokkaido | Hokkaido | Wakkanai Natural Hot Spring Minato no Yu | Unknown | 1,768/yr |
| Hokkaido | Hokkaido | Kamuidake Onsen | Unknown | 1,756/yr |
| Oita | Kyushu & Okinawa | Hyotan Onsen | Unknown | 1,681/yr |
| Kyoto | Kinki | Refre Kayanosato | Unknown | 1,668/yr |
| Ehime | Shikoku | Higashi-Dogo Sora to Mori | Simple Thermal Spring Alkaline simple spring | 1,661/yr |
| Hokkaido | Hokkaido | Muroran Onsen Yurara | Unknown | 1,616/yr |
| Hyogo | Kinki | Hana no Yu | Radium Spring Simple weakly radioactive cold mineral spring (weakly alkaline, drinkable) | 1,607/yr |
| Oita | Kyushu & Okinawa | Kannawa Mushiyu (Steam Bath) | Unknown | 1,604/yr |
| Hokkaido | Hokkaido | Nagomi no Yu | Chloride Spring Sodium – strong chloride spring (hypertonic, weakly alkaline, high-temperature) | 1,573/yr |
| Kanagawa | Kanto | Kozoji Onsen Gyokusuiro | Unknown | 1,573/yr |
| Yamanashi | Chubu | Tsuzumigawa Onsen | Simple Thermal Spring Simple spring | 1,551/yr |
| Oita | Kyushu & Okinawa | Furo-sen | Unknown | 1,539/yr |
| Toyama | Chubu | Nukumori no Sato | Simple Thermal Spring Simple spring | 1,510/yr |
| Nagano | Chubu | Tatsushima Onsen Seseragi no Yu | Unknown | 1,489/yr |
| Nagano | Chubu | Yurakukan | Unknown | 1,422/yr |
| Toyama | Chubu | Yumedokoro Unazuki | Unknown | 1,414/yr |
| Ehime | Shikoku | Tsubaki Exchange Hall Tsubaki Onsen Komatsu | Other Hypotonic, weakly alkaline, low-temperature spring | 1,368/yr |
| Tochigi | Kanto | Spa Resort Rib Max | Unknown | 1,351/yr |
| Ehime | Shikoku | Shimanami Onsen Kisuke no Yu | Other Hypertonic, weakly alkaline, low-temperature spring | 1,301/yr |
| Shizuoka | Chubu | Fugaku Onsen Hana no Yu | Simple Thermal Spring Simple spring | 1,276/yr |
| Yamagata | Tohoku | Mamurogawa Onsen Bairien | Other Sodium chloride spring | 1,275/yr |
| Yamagata | Tohoku | Yanagawa Onsen | Sulfate Spring Sulfate spring | 1,260/yr |
| Ehime | Shikoku | Mare Grazia Omishima | Unknown | 1,246/yr |
| Saitama | Kanto | Mori no Seseragi Nagomi | Chloride Spring Sodium – chloride spring | 1,220/yr |
| Ehime | Shikoku | Riraku | Unknown | 1,201/yr |
| Mie | Kinki | Kuwana Natural Hot Spring | Chloride Spring Sodium – chloride spring | 1,183/yr |
| Nagano | Chubu | Suzumushi-so | Unknown | 1,176/yr |
| Gunma | Kanto | Hana no Eki Katashina Hanasaki no Yu | Simple Thermal Spring Alkaline simple spring | 1,168/yr |
| Yamagata | Tohoku | Kahoku Onsen | Chloride Spring Sodium – chloride spring | 1,160/yr |
| Toyama | Chubu | Natural Hot Spring Kaio | Chloride Spring Strong chloride spring | 1,155/yr |
| Hokkaido | Hokkaido | Bifuka Onsen | Chloride Spring Chloride spring / bicarbonate spring | 1,147/yr |
| Tochigi | Kanto | Nikko City Yunishigawa Mizu no Sato | Simple Thermal Spring Simple spring | 1,142/yr |
| Ehime | Shikoku | Nibukawa Seseragi Exchange Hall | Unknown | 1,140/yr |
| Hokkaido | Hokkaido | New Chitose Airport Onsen | Chloride Spring Sodium – chloride spring | 1,138/yr |
| Ibaraki | Kanto | Ukuraku no Yu Jiuo | Unknown | 1,131/yr |
| Tochigi | Kanto | Nasu-Shiobara Ekimae Onsen | Chloride Spring Sodium/calcium chloride spring | 1,124/yr |
| Yamanashi | Chubu | Hayabusa Onsen | Simple Thermal Spring Simple spring | 1,082/yr |
| Toyama | Chubu | Ushidake Onsen Health Center | Unknown | 1,047/yr |
| Toyama | Chubu | Inari Mineral Spring | Iron Spring Alkaline (contains iron) | 984/yr |
| Hyogo | Kinki | Kitamaekan | Unknown | 980/yr |
| Toyama | Chubu | Horinji Onsen | Chloride Spring Sodium – sulfate/chloride spring (hypotonic, alkaline, high-temperature) | 979/yr |
| Oita | Kyushu & Okinawa | Kusu Onsen | Unknown | 972/yr |
| Gifu | Chubu | Shirakawa-go no Yu | Chloride Spring Sodium – chloride mineral spring | 968/yr |
| Hokkaido | Hokkaido | Rakuraku Onsen | Unknown | 966/yr |
| Toyama | Chubu | Asahi Town Environmental Exchange Facility Rakuchi-no | Unknown | 949/yr |
| Yamagata | Tohoku | Himawari Onsen Yu-ra-ra | Unknown | 937/yr |
| Okinawa | Kyushu & Okinawa | Natural Hot Spring Aroma | Other Iodine-bearing salt spring | 937/yr |
| Hyogo | Kinki | Nanakama Onsen Yurakukan | Unknown | 903/yr |
| Niigata | Chubu | Senju Onsen Sennen no Yu | Unknown | 896/yr |
| Toyama | Chubu | Natural Hot Spring Kaze no Mori | Simple Thermal Spring Simple spring | 858/yr |
| Shizuoka | Chubu | Yu Trio | Unknown | 858/yr |
| Shizuoka | Chubu | Itawari no Yu | Chloride Spring Sodium – chloride/bicarbonate spring (hypotonic, alkaline, low-temperature) | 835/yr |
| Shizuoka | Chubu | Shimada City Tashiro no Sato Onsen Itawari no Yu | Unknown | 835/yr |
| Gunma | Kanto | Takayama Onsen Fureai Plaza | Unknown | 833/yr |
| Toyama | Chubu | Taikoyama Natural Hot Spring Taiko no Yu | Chloride Spring Sodium – strong chloride spring | 821/yr |
| Wakayama | Kinki | Saki no Yu Editor's Pick An outer bath of Shirahama Onsen, one of Japan's oldest hot springs, known for its open-air bath overlooking the Pacific Ocean. | Chloride Spring Sodium – chloride spring | 811/yr |
| Aichi | Chubu | Higashiura Hana no Yu | Unknown | 782/yr |
| Aomori | Tohoku | Kintaro Onsen (Aomori) | Sulfur Spring Sulfur-bearing sodium/calcium chloride spring (hydrogen-sulfide type) | 764/yr |
| Nagasaki | Kyushu & Okinawa | Iimori Tsuki no Oka Onsen | Unknown | 764/yr |
| Hokkaido | Hokkaido | Yunomi no Yu | Chloride Spring Sodium strong chloride spring (chloride spring) | 691/yr |
| Tochigi | Kanto | Tochigi Onsen Yuraku no Sato | Bicarbonate Spring Bicarbonate spring (baking-soda spring) | 691/yr |
| Gunma | Kanto | Takayama Onsen | Unknown | 669/yr |
| Nagano | Chubu | Yu-furu Tanaka | Unknown | 656/yr |
| Fukushima | Tohoku | Sunny Land Konan | Unknown | 656/yr |
| Tottori | Chugoku | Minato Onsen Honokami | Unknown | 573/yr |
| Tottori | Chugoku | Minato Onsenkan | Unknown | 573/yr |
| Niigata | Chubu | Kandachi no Yu | Simple Thermal Spring Alkaline simple spring | 563/yr |
| Miyagi | Tohoku | Ayashi Tenku no Yu Soyogi no Mori | Chloride Spring Chloride spring | 550/yr |
| Nagano | Chubu | Nakano City Toyota Onsen Park Momiji-so | Unknown | 518/yr |
| Toyama | Chubu | 37BASE | Unknown | 502/yr |
| Saitama | Kanto | 100 no Yu | Unknown | 499/yr |
| Toyama | Chubu | Onuma Experience & Exchange Facility Tochi no Yu | Unknown | 487/yr |
| Hyogo | Kinki | Kato City Takino Exchange & Wellness Center | Chloride Spring Chloride spring (contains calcium, sodium and chloride ions, etc.) | 474/yr |
| Hokkaido | Hokkaido | Bogaku no Yu | Unknown | 453/yr |
| Toyama | Chubu | Grand Spa Kanoen | Unknown | 323/yr |
| Toyama | Chubu | Nanto City Iguchi Experience & Exchange Center Yu-yu Land Hanatsubaki | Unknown | 256/yr |
| Ishikawa | Chubu | Health Promotion Center Athlon | Unknown | 255/yr |
| Toyama | Chubu | Inami Exchange Hall La Foret | Unknown | 231/yr |
| Fukuoka | Kyushu & Okinawa | Shiraito no Yu | Unknown | 195/yr |
| Toyama | Chubu | Spa Alps | Unknown | 175/yr |
| Toyama | Chubu | Unazuki Yu no Eki Editor's Pick A day-use bathing facility in Unazuki Onsen, serving as a base for sightseeing in the Kurobe Gorge. | Simple Thermal Spring Simple spring | — |
| Hokkaido | Hokkaido | Yumemoto Sagiri-yu Editor's Pick A day-use bathing facility in the center of Noboribetsu Onsen town, offering the sulfur spring that is one of Noboribetsu's most representative water types among its many mineral springs. | Sulfur Spring Acidic sulfur spring | — |
| Tokyo | Kanto | Okutama Onsen Moegi no Yu Editor's Pick A day-use hot spring facility near Lake Okutama, a rarity within central Tokyo. | Simple Thermal Spring Alkaline simple spring | — |
| Nagano | Chubu | Shibu Onsen Oyu Editor's Pick The central communal bathhouse of Shibu Onsen's 'nine-bath pilgrimage,' a symbol of its outdoor-bathhouse culture. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Nagano | Chubu | Shibu Onsen Ichiban-yu Hatsuyu Editor's Pick Regarded as the first bath of the nine-bath pilgrimage, a communal bathhouse. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Nagano | Chubu | Nozawa Onsen Oyu Editor's Pick The central communal bathhouse of Nozawa Onsen's '13 outdoor baths' circuit, a symbol of the town with Edo-period architecture. | Sulfur Spring Simple sulfur spring | — |
| Nagano | Chubu | Nozawa Onsen Asagama-no-yu Editor's Pick A communal bathhouse beside Asagama, the town's source-spring site known for its near-90°C water. | Sulfur Spring Sulfur-bearing sodium/calcium – sulfate spring | — |
| Ehime | Shikoku | Dogo Onsen Annex Asuka no Yuzen Editor's Pick A newer outer bathhouse next to Dogo Onsen Honkan, built with an Asuka-period motif. | Simple Thermal Spring Alkaline simple spring | — |
| Yamagata | Tohoku | Zao Onsen Kamiyu Communal Bathhouse Editor's Pick An old-style communal bathhouse maintained by local residents. | Sulfur Spring Acidic sulfur spring | — |
| Kanagawa | Kanto | Tenzan Tojikyo Editor's Pick A day-use hot spring facility in a traditional farmhouse style near Hakone-Yumoto, known for its open-air rock bath. | Simple Thermal Spring Simple spring | — |
| Kanagawa | Kanto | Tsunashima Gensen Yukemuri no Sho Editor's Pick A complex of natural hot-spring baths and stone saunas, known for its dark-brown water and the carbonated 'Tansan Kohaku-yu' (carbonated amber bath). | Bicarbonate Spring Sodium – bicarbonate cold mineral spring | — |
| Kanagawa | Kanto | Miyamaedaira Gensen Yukemuri no Sho Editor's Pick A complex of natural hot-spring baths and stone saunas, known for its dark-brown water. | Bicarbonate Spring Sodium – bicarbonate spring | — |
| Saitama | Kanto | Chichibu Onsen Mangan no Yu Editor's Pick A day-use hot spring facility in the Chichibu area. | Simple Thermal Spring Alkaline simple spring | — |
| Saitama | Kanto | Hyakkannon Onsen Editor's Pick Free-flowing source water derived from fossil seawater, given top ratings for water quality and supply method by the Japan Spa Association and others. | Chloride Spring Sodium – strong chloride spring | — |
| Gunma | Kanto | Otaki no Yu Editor's Pick A day-use bathing facility representative of Kusatsu Onsen, known for its 'awase-yu' method of gradually acclimating bathers to the hot water temperature. | Sulfur Spring Acidic sulfur spring | — |
| Gunma | Kanto | Sainokawara Open-Air Bath Editor's Pick A vast open-air bath within Sainokawara Park. | Chloride Spring Acidic – chloride/sulfate spring | — |
| Gunma | Kanto | Manza Onsen Nisshinkan Editor's Pick A long-established inn with three bathing areas and milky-white water, welling up at 1,800 m with one of the highest sulfur concentrations in Japan. | Sulfur Spring Acidic, sulfur-bearing magnesium/sodium – sulfate spring | — |
| Yamanashi | Chubu | Isawa Onsen Sakura Onsenkan Editor's Pick A day-use hot spring facility run by Fuefuki City, using spring water from Isawa Onsen. | Simple Thermal Spring Alkaline simple spring | — |
| Fukushima | Tohoku | Sabako-yu Editor's Pick The symbolic wooden communal bathhouse of Iizaka Onsen, considered one of Japan's Three Ancient Hot Springs. | Simple Thermal Spring Simple spring | — |
| Chiba | Kanto | Iwai Yuki no Yu Editor's Pick A day-use hot spring facility in the Minami-Boso Onsen area. | Chloride Spring Sodium – chloride spring | — |
| Niigata | Chubu | Yama no Yu Editor's Pick A communal bathhouse in Echigo-Yuzawa Onsen, an old-style bathhouse used by locals and travelers alike. | Sulfur Spring Simple sulfur spring | — |
| Miyagi | Tohoku | Takinoyu Editor's Pick A communal bathhouse with a thousand-year history as the sacred water of Naruko Onsen Shrine. | Sulfur Spring Sulfur-bearing sodium/aluminum/calcium/iron(II) – sulfate spring | — |
| Ibaraki | Kanto | Okukuji Daigo no Yu Editor's Pick A town-run day-use hot spring facility in the Okukuji Onsen area. | Simple Thermal Spring Simple spring | — |
| Aichi | Chubu | Sanage Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in the Sanage Onsen area. | Simple Thermal Spring Simple spring | — |
| Mie | Kinki | Yunoyama Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yunoyama Onsen, spread across the foot of Mt. Gozaisho. | Simple Thermal Spring Simple spring | — |
| Kyoto | Kinki | Kurama Onsen Editor's Pick An open-air day-bathing facility partway up Mt. Kurama, a quiet spring away from central Kyoto. | Simple Thermal Spring Alkaline simple spring | — |
| Hiroshima | Chugoku | Yuki Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yuki Onsen, on the outskirts of Hiroshima city. | Simple Thermal Spring Simple spring | — |
| Kumamoto | Kyushu & Okinawa | Kurokawa Onsen Ikoi no Ie Editor's Pick A town-run day-use bathing facility in Kurokawa Onsen. | Simple Thermal Spring Simple spring | — |
| Iwate | Tohoku | Dai Onsen Communal Bathhouse Editor's Pick A locally managed communal bathhouse passed down in Dai Onsen, part of the Hanamaki Minami Onsen valley. | Simple Thermal Spring Simple spring | — |
| Fukui | Chubu | Saint Pia Awara Editor's Pick A town-run day-use hot spring facility at the heart of Awara Onsen. | Chloride Spring Sodium – chloride spring | — |
| Shiga | Kinki | Katata Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Katata, on the shore of Lake Biwa. | Simple Thermal Spring Simple spring | — |
| Shimane | Chugoku | Tamatsukuri Onsen Yu-yu Editor's Pick A town-run day-use hot spring facility in the Tamatsukuri Onsen district. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Fukuoka | Kyushu & Okinawa | Harazuru Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Harazuru Onsen, spread along the Chikugo River. | Chloride Spring Sodium – chloride spring | — |
| Nagasaki | Kyushu & Okinawa | Kojigoku Onsenkan Editor's Pick A day-use bathing facility near Unzen Jigoku, known for its milky-white sulfur spring. | Sulfur Spring Acidic sulfur spring | — |
| Okinawa | Kyushu & Okinawa | Yuinchi Nanjo Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in Nanjo City, Okinawa Prefecture. | Chloride Spring Sodium – strong chloride spring | — |
| Osaka | Kinki | Minoh Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in the Minoh Onsen area, known for Minoh Falls. | Simple Thermal Spring Simple spring | — |
| Nara | Kinki | Dorogawa Onsen Center Editor's Pick A day-use bathing facility in the Dorogawa Onsen area at the foot of Mt. Omine. | Simple Thermal Spring Simple spring | — |
| Yamaguchi | Chugoku | Yuda Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yuda Onsen, welling up in the center of Yamaguchi City. | Simple Thermal Spring Simple spring | — |
| Tokushima | Shikoku | Minami-Awa Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in the Minami-Awa Onsen area of southern Tokushima Prefecture. | Chloride Spring Sodium – chloride spring | — |
| Kagawa | Shikoku | Konpira Onsen Village Day-Bathing Facility Editor's Pick A day-use bathing facility in Konpira Onsen Village, the approach town to Kotohira-gu Shrine. | Chloride Spring Sodium – chloride spring | — |
| Kochi | Shikoku | Yusuhara Onsen Matsurikan Editor's Pick A day-use hot spring facility in Yusuhara Town. | Simple Thermal Spring Simple spring | — |
| Miyazaki | Kyushu & Okinawa | Ebino Kogen Onsen Communal Bathhouse Editor's Pick A day-use bathing facility on the Ebino Plateau in the Kirishima mountain range. | Unknown | — |
| Saitama | Kanto | 100 no Yu | Unknown | 499/yr |
| Toyama | Chubu | 37BASE | Unknown | 502/yr |
| Shiga | Kinki | Agaryanse | Unknown | 4,518/yr |
| Tokyo | Kanto | Akigawa Valley Seotonoyu | Unknown | 2,677/yr |
| Toyama | Chubu | Asahi Town Environmental Exchange Facility Rakuchi-no | Unknown | 949/yr |
| Miyagi | Tohoku | Ayashi Tenku no Yu Soyogi no Mori | Chloride Spring Chloride spring | 550/yr |
| Nagano | Chubu | Azumino Shakunage no Yu | Simple Thermal Spring Simple spring | 2,060/yr |
| Oita | Kyushu & Okinawa | Beppu Kaihin Sunayu (Beach Sand Bath) | Unknown | 2,112/yr |
| Hokkaido | Hokkaido | Bifuka Onsen | Chloride Spring Chloride spring / bicarbonate spring | 1,147/yr |
| Ishikawa | Chubu | Bird Humming Torigoe | Unknown | 2,156/yr |
| Hokkaido | Hokkaido | Bogaku no Yu | Unknown | 453/yr |
| Saitama | Kanto | Chichibu Onsen Mangan no Yu Editor's Pick A day-use hot spring facility in the Chichibu area. | Simple Thermal Spring Alkaline simple spring | — |
| Chiba | Kanto | Clean Spa Ichikawa | Unknown | 1,907/yr |
| Iwate | Tohoku | Dai Onsen Communal Bathhouse Editor's Pick A locally managed communal bathhouse passed down in Dai Onsen, part of the Hanamaki Minami Onsen valley. | Simple Thermal Spring Simple spring | — |
| Ehime | Shikoku | Dogo Onsen Annex Asuka no Yuzen Editor's Pick A newer outer bathhouse next to Dogo Onsen Honkan, built with an Asuka-period motif. | Simple Thermal Spring Alkaline simple spring | — |
| Ehime | Shikoku | Dogo Onsen Honkan Editor's Pick The symbolic wooden communal bathhouse of Dogo Onsen, whose history spans 3,000 years and which is associated with Natsume Soseki (an Important Cultural Property of Japan). | Simple Thermal Spring Alkaline simple spring | 14,990/yr |
| Yamagata | Tohoku | Dohmeki Onsen | Chloride Spring Sodium strong chloride spring | 3,725/yr |
| Nara | Kinki | Dorogawa Onsen Center Editor's Pick A day-use bathing facility in the Dorogawa Onsen area at the foot of Mt. Omine. | Simple Thermal Spring Simple spring | — |
| Miyazaki | Kyushu & Okinawa | Ebino Kogen Onsen Communal Bathhouse Editor's Pick A day-use bathing facility on the Ebino Plateau in the Kirishima mountain range. | Unknown | — |
| Hokkaido | Hokkaido | Eniwa Onsen La Foret | Unknown | 1,899/yr |
| Hokkaido | Hokkaido | Eniwa no Yu | Unknown | 1,899/yr |
| Shizuoka | Chubu | Fugaku Onsen Hana no Yu | Simple Thermal Spring Simple spring | 1,276/yr |
| Yamanashi | Chubu | Fujiyama Onsen | Unknown | 62,746/yr |
| Toyama | Chubu | Funahashi Tateyama Natural Hot Spring Yumegokochi | Chloride Spring Sodium strong chloride spring | 2,000/yr |
| Oita | Kyushu & Okinawa | Furo-sen | Unknown | 1,539/yr |
| Gifu | Chubu | Gero Onsen Shirasagi no Yu Editor's Pick A town-run communal bathhouse named for the White Heron legend, symbolic of Gero Onsen. | Simple Thermal Spring Alkaline simple spring | 42,197/yr |
| Hyogo | Kinki | Gin no Yu (Silver Bath) Editor's Pick Also run by the city of Kobe, this communal bathhouse offers the clear, colorless 'silver spring' (a carbonated, radium-bearing spring). | Radium Spring Radon spring (carbonated spring) | 73,619/yr |
| Toyama | Chubu | Grand Spa Kanoen | Unknown | 323/yr |
| Akita | Tohoku | Hachimori Isaribi Onsen Hatahata-kan | Unknown | 2,422/yr |
| Nagano | Chubu | Hakuba Happo Onsen | Simple Thermal Spring Alkaline simple spring | 3,097/yr |
| Oita | Kyushu & Okinawa | Hamawaki Onsen | Unknown | 2,217/yr |
| Gunma | Kanto | Hana no Eki Katashina Hanasaki no Yu | Simple Thermal Spring Alkaline simple spring | 1,168/yr |
| Hyogo | Kinki | Hana no Yu | Radium Spring Simple weakly radioactive cold mineral spring (weakly alkaline, drinkable) | 1,607/yr |
| Tokyo | Kanto | Hanakei no Yu | Unknown | 72,143/yr |
| Shizuoka | Chubu | Hanasaki no Yu | Unknown | 1,777/yr |
| Saitama | Kanto | Hanawaraku no Yu | Unknown | 2,437/yr |
| Fukuoka | Kyushu & Okinawa | Harazuru Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Harazuru Onsen, spread along the Chikugo River. | Chloride Spring Sodium – chloride spring | — |
| Yamanashi | Chubu | Hayabusa Onsen | Simple Thermal Spring Simple spring | 1,082/yr |
| Ishikawa | Chubu | Health Promotion Center Athlon | Unknown | 255/yr |
| Ehime | Shikoku | Higashi-Dogo Sora to Mori | Simple Thermal Spring Alkaline simple spring | 1,661/yr |
| Aichi | Chubu | Higashiura Hana no Yu | Unknown | 782/yr |
| Yamagata | Tohoku | Himawari Onsen Yu-ra-ra | Unknown | 937/yr |
| Toyama | Chubu | Horinji Onsen | Chloride Spring Sodium – sulfate/chloride spring (hypotonic, alkaline, high-temperature) | 979/yr |
| Yamanashi | Chubu | Hottarakashi Onsen | Simple Thermal Spring Simple spring | 10,703/yr |
| Iwate | Tohoku | Hotto Yuda | Unknown | 18,093/yr |
| Saitama | Kanto | Hyakkannon Onsen Editor's Pick Free-flowing source water derived from fossil seawater, given top ratings for water quality and supply method by the Japan Spa Association and others. | Chloride Spring Sodium – strong chloride spring | — |
| Oita | Kyushu & Okinawa | Hyotan Onsen | Unknown | 1,681/yr |
| Nagasaki | Kyushu & Okinawa | Iimori Tsuki no Oka Onsen | Unknown | 764/yr |
| Kanagawa | Kanto | Iiyama Onsen | Simple Thermal Spring Simple spring | 4,028/yr |
| Toyama | Chubu | Inami Exchange Hall La Foret | Unknown | 231/yr |
| Toyama | Chubu | Inari Mineral Spring | Iron Spring Alkaline (contains iron) | 984/yr |
| Yamanashi | Chubu | Isawa Onsen Sakura Onsenkan Editor's Pick A day-use hot spring facility run by Fuefuki City, using spring water from Isawa Onsen. | Simple Thermal Spring Alkaline simple spring | — |
| Shizuoka | Chubu | Itawari no Yu | Chloride Spring Sodium – chloride/bicarbonate spring (hypotonic, alkaline, low-temperature) | 835/yr |
| Chiba | Kanto | Iwai Yuki no Yu Editor's Pick A day-use hot spring facility in the Minami-Boso Onsen area. | Chloride Spring Sodium – chloride spring | — |
| Shimane | Chugoku | Izumo Iris no Oka | Unknown | 3,104/yr |
| Tokyo | Kanto | Kabe Onsen | Unknown | 3,168/yr |
| Kanagawa | Kanto | Kabutoyu Onsen Sansuiro | Unknown | 2,355/yr |
| Hiroshima | Chugoku | Kagura Monzen Tojimura | Unknown | 2,252/yr |
| Yamagata | Tohoku | Kahoku Onsen | Chloride Spring Sodium – chloride spring | 1,160/yr |
| Hokkaido | Hokkaido | Kamuidake Onsen | Unknown | 1,756/yr |
| Niigata | Chubu | Kandachi no Yu | Simple Thermal Spring Alkaline simple spring | 563/yr |
| Oita | Kyushu & Okinawa | Kannawa Mushiyu (Steam Bath) | Unknown | 1,604/yr |
| Kyoto | Kinki | Kasagi Onsen | Unknown | 15,892/yr |
| Nagano | Chubu | Katakurakan | Unknown | 11,014/yr |
| Shiga | Kinki | Katata Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Katata, on the shore of Lake Biwa. | Simple Thermal Spring Simple spring | — |
| Hyogo | Kinki | Kato City Takino Exchange & Wellness Center | Chloride Spring Chloride spring (contains calcium, sodium and chloride ions, etc.) | 474/yr |
| Tokyo | Kanto | Keio Takaosan Onsen | Simple Thermal Spring Alkaline simple spring | 4,868/yr |
| Oita | Kyushu & Okinawa | Keirin Onsen | Unknown | 5,451/yr |
| Hyogo | Kinki | Kin no Yu (Gold Bath) Editor's Pick A communal bathhouse run by the city of Kobe. The iconic outer bath of Arima Onsen, where visitors can easily enjoy the reddish-brown 'gold spring' water. | Chloride Spring Iron-bearing sodium – strong chloride spring | 73,619/yr |
| Aomori | Tohoku | Kintaro Onsen (Aomori) | Sulfur Spring Sulfur-bearing sodium/calcium chloride spring (hydrogen-sulfide type) | 764/yr |
| Ehime | Shikoku | Kisuke Box | Unknown | 4,687/yr |
| Hyogo | Kinki | Kitamaekan | Unknown | 980/yr |
| Nagasaki | Kyushu & Okinawa | Kojigoku Onsenkan Editor's Pick A day-use bathing facility near Unzen Jigoku, known for its milky-white sulfur spring. | Sulfur Spring Acidic sulfur spring | — |
| Kagawa | Shikoku | Konpira Onsen Village Day-Bathing Facility Editor's Pick A day-use bathing facility in Konpira Onsen Village, the approach town to Kotohira-gu Shrine. | Chloride Spring Sodium – chloride spring | — |
| Fukushima | Tohoku | Koriyama Yuraxx Atami | Unknown | 1,989/yr |
| Kanagawa | Kanto | Kozoji Onsen Gyokusuiro | Unknown | 1,573/yr |
| Tokyo | Kanto | Kur Garden (Tama Tech) | Unknown | 58,403/yr |
| Kyoto | Kinki | Kurama Onsen Editor's Pick An open-air day-bathing facility partway up Mt. Kurama, a quiet spring away from central Kyoto. | Simple Thermal Spring Alkaline simple spring | — |
| Kumamoto | Kyushu & Okinawa | Kurokawa Onsen Ikoi no Ie Editor's Pick A town-run day-use bathing facility in Kurokawa Onsen. | Simple Thermal Spring Simple spring | — |
| Oita | Kyushu & Okinawa | Kusu Onsen | Unknown | 972/yr |
| Mie | Kinki | Kuwana Natural Hot Spring | Chloride Spring Sodium – chloride spring | 1,183/yr |
| Tokyo | Kanto | LaQua | Unknown | 11,137/yr |
| Kanagawa | Kanto | Lake Sagami MORI MORI | Unknown | 30,555/yr |
| Yamagata | Tohoku | Mamurogawa Onsen Bairien | Other Sodium chloride spring | 1,275/yr |
| Kanagawa | Kanto | Manten no Yu (Yokohama) A mineral spring meeting the standards of Japan's Hot Spring Act. | Other (Mineral spring meeting the Hot Springs Act standard) | 2,075/yr |
| Gunma | Kanto | Manza Onsen Nisshinkan Editor's Pick A long-established inn with three bathing areas and milky-white water, welling up at 1,800 m with one of the highest sulfur concentrations in Japan. | Sulfur Spring Acidic, sulfur-bearing magnesium/sodium – sulfate spring | — |
| Ehime | Shikoku | Mare Grazia Omishima | Unknown | 1,246/yr |
| Shizuoka | Chubu | Marine Spa Atami | Unknown | 2,030/yr |
| Tokushima | Shikoku | Minami-Awa Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in the Minami-Awa Onsen area of southern Tokushima Prefecture. | Chloride Spring Sodium – chloride spring | — |
| Tottori | Chugoku | Minato Onsen Honokami | Unknown | 573/yr |
| Tottori | Chugoku | Minato Onsenkan | Unknown | 573/yr |
| Osaka | Kinki | Minoh Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in the Minoh Onsen area, known for Minoh Falls. | Simple Thermal Spring Simple spring | — |
| Hiroshima | Chugoku | Miroku no Sato | Unknown | 18,442/yr |
| Tottori | Chugoku | Misasa Onsen Kawara-buro Editor's Pick A free open-air bath on the riverbank of the Mitoku River, symbolic of Misasa Onsen, known for having some of the highest radon content in the world. | Radium Spring Radioactive spring (radon spring) | 26,558/yr |
| Kanagawa | Kanto | Miyamaedaira Gensen Yukemuri no Sho Editor's Pick A complex of natural hot-spring baths and stone saunas, known for its dark-brown water. | Bicarbonate Spring Sodium – bicarbonate spring | — |
| Saitama | Kanto | Mori no Seseragi Nagomi | Chloride Spring Sodium – chloride spring | 1,220/yr |
| Tokyo | Kanto | Murayama Onsen Katakuri no Yu | Unknown | 1,819/yr |
| Hokkaido | Hokkaido | Muroran Onsen Yurara | Unknown | 1,616/yr |
| Hyogo | Kinki | Nada Onsen | Chloride Spring Sodium – bicarbonate/chloride low-temperature spring | 2,015/yr |
| Hokkaido | Hokkaido | Nagareyama Onsen | Sulfate Spring Sodium/calcium – sulfate spring | 4,674/yr |
| Hokkaido | Hokkaido | Nagomi no Yu | Chloride Spring Sodium – strong chloride spring (hypertonic, weakly alkaline, high-temperature) | 1,573/yr |
| Nagano | Chubu | Nakano City Toyota Onsen Park Momiji-so | Unknown | 518/yr |
| Gifu | Chubu | Nakatsugawa Onsen Kur Resort Yufunesawa | Bicarbonate Spring Sodium bicarbonate spring (baking-soda spring) | 2,320/yr |
| Hyogo | Kinki | Nanakama Onsen Yurakukan | Unknown | 903/yr |
| Kanagawa | Kanto | Nanasawa Onsen | Simple Thermal Spring Simple spring | 5,933/yr |
| Toyama | Chubu | Nanto City Iguchi Experience & Exchange Center Yu-yu Land Hanatsubaki | Unknown | 256/yr |
| Tochigi | Kanto | Nasu-Shiobara Ekimae Onsen | Chloride Spring Sodium/calcium chloride spring | 1,124/yr |
| Okinawa | Kyushu & Okinawa | Natural Hot Spring Aroma | Other Iodine-bearing salt spring | 937/yr |
| Toyama | Chubu | Natural Hot Spring Kaio | Chloride Spring Strong chloride spring | 1,155/yr |
| Toyama | Chubu | Natural Hot Spring Kaze no Mori | Simple Thermal Spring Simple spring | 858/yr |
| Hyogo | Kinki | Nature Spa Takarazuka | Unknown | 3,462/yr |
| Hokkaido | Hokkaido | New Chitose Airport Onsen | Chloride Spring Sodium – chloride spring | 1,138/yr |
| Ehime | Shikoku | Nibukawa Seseragi Exchange Hall | Unknown | 1,140/yr |
| Niigata | Chubu | Niitsu Onsen | Chloride Spring Iodine-bearing sodium – chloride/bicarbonate spring | 4,651/yr |
| Tochigi | Kanto | Nikko City Yunishigawa Mizu no Sato | Simple Thermal Spring Simple spring | 1,142/yr |
| Nagano | Chubu | Nozawa Onsen Asagama-no-yu Editor's Pick A communal bathhouse beside Asagama, the town's source-spring site known for its near-90°C water. | Sulfur Spring Sulfur-bearing sodium/calcium – sulfate spring | — |
| Nagano | Chubu | Nozawa Onsen Oyu Editor's Pick The central communal bathhouse of Nozawa Onsen's '13 outdoor baths' circuit, a symbol of the town with Edo-period architecture. | Sulfur Spring Simple sulfur spring | — |
| Toyama | Chubu | Nukumori no Sato | Simple Thermal Spring Simple spring | 1,510/yr |
| Chiba | Kanto | Oedo Onsen Monogatari Urayasu Mangekyo | Unknown | 7,478/yr |
| Ibaraki | Kanto | Okukuji Daigo no Yu Editor's Pick A town-run day-use hot spring facility in the Okukuji Onsen area. | Simple Thermal Spring Simple spring | — |
| Tokyo | Kanto | Okutama Onsen Moegi no Yu Editor's Pick A day-use hot spring facility near Lake Okutama, a rarity within central Tokyo. | Simple Thermal Spring Alkaline simple spring | — |
| Miyagi | Tohoku | Onagawa Onsen Yupoppo | Other Hypotonic alkaline spring | 2,941/yr |
| Saitama | Kanto | Onsen Balcony King & Queen | Unknown | 2,597/yr |
| Toyama | Chubu | Onuma Experience & Exchange Facility Tochi no Yu | Unknown | 487/yr |
| Gunma | Kanto | Otaki no Yu Editor's Pick A day-use bathing facility representative of Kusatsu Onsen, known for its 'awase-yu' method of gradually acclimating bathers to the hot water temperature. | Sulfur Spring Acidic sulfur spring | — |
| Tochigi | Kanto | Oyama Omoigawa Onsen | Unknown | 2,230/yr |
| Akita | Tohoku | Quince Moriyoshi | Unknown | 6,804/yr |
| Hokkaido | Hokkaido | Rakuraku Onsen | Unknown | 966/yr |
| Kyoto | Kinki | Refre Kayanosato | Unknown | 1,668/yr |
| Yamagata | Tohoku | Ringo Onsen (Apple Onsen) | Chloride Spring Sodium – strong chloride spring | 2,046/yr |
| Ehime | Shikoku | Riraku | Unknown | 1,201/yr |
| Fukushima | Tohoku | Sabako-yu Editor's Pick The symbolic wooden communal bathhouse of Iizaka Onsen, considered one of Japan's Three Ancient Hot Springs. | Simple Thermal Spring Simple spring | — |
| Gunma | Kanto | Sainokawara Open-Air Bath Editor's Pick A vast open-air bath within Sainokawara Park. | Chloride Spring Acidic – chloride/sulfate spring | — |
| Fukui | Chubu | Saint Pia Awara Editor's Pick A town-run day-use hot spring facility at the heart of Awara Onsen. | Chloride Spring Sodium – chloride spring | — |
| Saitama | Kanto | Saitama Seikanji Onsen | Chloride Spring Chloride spring | 2,590/yr |
| Wakayama | Kinki | Saki no Yu Editor's Pick An outer bath of Shirahama Onsen, one of Japan's oldest hot springs, known for its open-air bath overlooking the Pacific Ocean. | Chloride Spring Sodium – chloride spring | 811/yr |
| Kumamoto | Kyushu & Okinawa | Sakura-yu | Unknown | 2,052/yr |
| Aichi | Chubu | Sanage Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in the Sanage Onsen area. | Simple Thermal Spring Simple spring | — |
| Saitama | Kanto | Sawarabi no Yu | Simple Thermal Spring Alkaline simple spring | 1,862/yr |
| Niigata | Chubu | Senju Onsen Sennen no Yu | Unknown | 896/yr |
| Nagano | Chubu | Shibu Onsen Ichiban-yu Hatsuyu Editor's Pick Regarded as the first bath of the nine-bath pilgrimage, a communal bathhouse. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Nagano | Chubu | Shibu Onsen Oyu Editor's Pick The central communal bathhouse of Shibu Onsen's 'nine-bath pilgrimage,' a symbol of its outdoor-bathhouse culture. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Tochigi | Kanto | Shika no Yu Editor's Pick A communal bathhouse with over 1,300 years of history, the birthplace of Nasu Onsen, lined with several baths of differing temperatures. | Sulfur Spring Sulfur-bearing calcium/sodium – sulfate/chloride spring | 8,417/yr |
| Shizuoka | Chubu | Shimada City Tashiro no Sato Onsen Itawari no Yu | Unknown | 835/yr |
| Ehime | Shikoku | Shimanami Onsen Kisuke no Yu | Other Hypertonic, weakly alkaline, low-temperature spring | 1,301/yr |
| Tochigi | Kanto | Shiobara Onsen Villages | Sulfur Spring Sulfur, acidic, sulfate, chloride, bicarbonate and simple springs | 10,416/yr |
| Fukuoka | Kyushu & Okinawa | Shiraito no Yu | Unknown | 195/yr |
| Gifu | Chubu | Shirakawa-go no Yu | Chloride Spring Sodium – chloride mineral spring | 968/yr |
| Saga | Kyushu & Okinawa | Siebold no Yu Editor's Pick The symbolic town-run communal bathhouse of Ureshino Onsen, known for its silky 'beautiful-skin' water. | Simple Thermal Spring Alkaline simple spring | 17,775/yr |
| Ishikawa | Chubu | Soyu Editor's Pick The communal bathhouse at the heart of Yamashiro Onsen, symbolic of this historic hot spring representative of the Hokuriku region. | Simple Thermal Spring Alkaline simple spring | 16,694/yr |
| Toyama | Chubu | Spa Alps | Unknown | 175/yr |
| Tokyo | Kanto | Spa LaQua | Unknown | 11,137/yr |
| Fukushima | Tohoku | Spa Resort Hawaiians | Unknown | 73,532/yr |
| Tochigi | Kanto | Spa Resort Rib Max | Unknown | 1,351/yr |
| Tokyo | Kanto | Spagium Japon | Chloride Spring Sodium – chloride/bicarbonate spring | 2,597/yr |
| Aomori | Tohoku | Sukayu | Sulfur Spring Acidic sulfur spring | 46,295/yr |
| Aomori | Tohoku | Sukayu Onsen Hiba Senninburo Editor's Pick Famous for its huge mixed-bathing hall built entirely of Hiba cypress; a renowned hot spring of the Hakkoda mountains open for day bathing, and Japan's first-designated National Health Resort. | Sulfur Spring Acidic, sulfur-bearing aluminum/iron(II) – sulfate/chloride spring | 46,295/yr |
| Kagoshima | Kyushu & Okinawa | Sunamushi Kaikan Sarakku Editor's Pick A facility symbolic of Ibusuki Onsen, offering the rare natural sand-steam bath experience found almost nowhere else in the world. | Chloride Spring Sodium – chloride spring | 10,406/yr |
| Okayama | Chugoku | Sunayu Editor's Pick A free mixed-bathing open-air bath welling up on the riverbank of the Asahi River, one of the finest in western Japan and symbolic of Yubara Onsen. | Simple Thermal Spring Simple spring | 10,837/yr |
| Fukushima | Tohoku | Sunny Land Konan | Unknown | 656/yr |
| Nagano | Chubu | Suzumushi-so | Unknown | 1,176/yr |
| Hyogo | Kinki | Taiko no Yu | Unknown | 6,299/yr |
| Toyama | Chubu | Taikoyama Natural Hot Spring Taiko no Yu | Chloride Spring Sodium – strong chloride spring | 821/yr |
| Gunma | Kanto | Takayama Onsen | Unknown | 669/yr |
| Gunma | Kanto | Takayama Onsen Fureai Plaza | Unknown | 833/yr |
| Oita | Kyushu & Okinawa | Takegawara Onsen Editor's Pick Founded in 1879, the city-run communal bathhouse representative of Beppu Onsen, also famous for its sand-bath treatments. | Unknown | 5,063/yr |
| Saga | Kyushu & Okinawa | Takeo Onsen Shinkan | Unknown | 1,959/yr |
| Miyagi | Tohoku | Takinoyu Editor's Pick A communal bathhouse with a thousand-year history as the sacred water of Naruko Onsen Shrine. | Sulfur Spring Sulfur-bearing sodium/aluminum/calcium/iron(II) – sulfate spring | — |
| Akita | Tohoku | Tamagawa Onsen Grand Bath Editor's Pick Known for its strongly acidic water at around pH 1.2, one of the most acidic in Japan, drawing therapeutic bathers ('toji') from across the country; day bathing available. | Chloride Spring Acidic, iron(II)-bearing aluminum – sulfate/chloride spring | 34,997/yr |
| Shimane | Chugoku | Tamatsukuri Onsen Yu-yu Editor's Pick A town-run day-use hot spring facility in the Tamatsukuri Onsen district. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Nagano | Chubu | Tatsushima Onsen Seseragi no Yu | Unknown | 1,489/yr |
| Ishikawa | Chubu | Tedori Onsen | Unknown | 2,156/yr |
| Kanagawa | Kanto | Tenzan Tojikyo Editor's Pick A day-use hot spring facility in a traditional farmhouse style near Hakone-Yumoto, known for its open-air rock bath. | Simple Thermal Spring Simple spring | — |
| Tokyo | Kanto | Thermae-yu | Unknown | 5,995/yr |
| Tochigi | Kanto | Tochigi Onsen Yuraku no Sato | Bicarbonate Spring Bicarbonate spring (baking-soda spring) | 691/yr |
| Tokyo | Kanto | Toshimaen Niwa no Yu | Chloride Spring Sodium – strong chloride spring | 7,194/yr |
| Ehime | Shikoku | Tsubaki Exchange Hall Tsubaki Onsen Komatsu | Other Hypotonic, weakly alkaline, low-temperature spring | 1,368/yr |
| Ibaraki | Kanto | Tsukuba Wellness Park | Unknown | 2,080/yr |
| Kanagawa | Kanto | Tsunashima Gensen Yukemuri no Sho Editor's Pick A complex of natural hot-spring baths and stone saunas, known for its dark-brown water and the carbonated 'Tansan Kohaku-yu' (carbonated amber bath). | Bicarbonate Spring Sodium – bicarbonate cold mineral spring | — |
| Fukui | Chubu | Tsuruga Kirameki Onsen Rela Port | Unknown | 3,611/yr |
| Yamanashi | Chubu | Tsuzumigawa Onsen | Simple Thermal Spring Simple spring | 1,551/yr |
| Ibaraki | Kanto | Ukuraku no Yu Jiuo | Unknown | 1,131/yr |
| Toyama | Chubu | Unazuki Yu no Eki Editor's Pick A day-use bathing facility in Unazuki Onsen, serving as a base for sightseeing in the Kurobe Gorge. | Simple Thermal Spring Simple spring | — |
| Toyama | Chubu | Ushidake Onsen Health Center | Unknown | 1,047/yr |
| Gunma | Kanto | Usui Pass Forest Park Exchange Hall 'Toge no Yu' | Chloride Spring Sodium – bicarbonate/chloride spring | 3,899/yr |
| Hokkaido | Hokkaido | Wakkanai Natural Hot Spring Minato no Yu | Unknown | 1,768/yr |
| Miyagi | Tohoku | Waseda Sajikiyu Editor's Pick A day-use bathing facility representative of the Naruko Onsen area, built after research into the local spring sources conducted by Waseda University students. | Sulfur Spring Sulfur-bearing sodium – sulfate/chloride spring | 18,941/yr |
| Niigata | Chubu | Yama no Yu Editor's Pick A communal bathhouse in Echigo-Yuzawa Onsen, an old-style bathhouse used by locals and travelers alike. | Sulfur Spring Simple sulfur spring | — |
| Shizuoka | Chubu | Yamada-yu Editor's Pick A neighborhood public bathhouse using spring water from Atami Onsen, well loved by locals. | Chloride Spring Sodium – chloride spring | 16,974/yr |
| Yamagata | Tohoku | Yanagawa Onsen | Sulfate Spring Sulfate spring | 1,260/yr |
| Yamanashi | Chubu | Yoshinoike Onsen | Simple Thermal Spring Simple spring | 2,399/yr |
| Shizuoka | Chubu | Yu Trio | Unknown | 858/yr |
| Nagano | Chubu | Yu-furu Tanaka | Unknown | 656/yr |
| Mie | Kinki | Yuami no Shima | Unknown | 10,538/yr |
| Yamaguchi | Chugoku | Yuda Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yuda Onsen, welling up in the center of Yamaguchi City. | Simple Thermal Spring Simple spring | — |
| Okinawa | Kyushu & Okinawa | Yuinchi Nanjo Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in Nanjo City, Okinawa Prefecture. | Chloride Spring Sodium – strong chloride spring | — |
| Hiroshima | Chugoku | Yuki Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yuki Onsen, on the outskirts of Hiroshima city. | Simple Thermal Spring Simple spring | — |
| Aichi | Chubu | Yukichiro | Simple Thermal Spring Weakly alkaline simple spring | 3,317/yr |
| Toyama | Chubu | Yumedokoro Unazuki | Unknown | 1,414/yr |
| Chiba | Kanto | Yumeguri Mangekyo | Unknown | 7,478/yr |
| Hokkaido | Hokkaido | Yumemoto Sagiri-yu Editor's Pick A day-use bathing facility in the center of Noboribetsu Onsen town, offering the sulfur spring that is one of Noboribetsu's most representative water types among its many mineral springs. | Sulfur Spring Acidic sulfur spring | — |
| Kanagawa | Kanto | Yunessun | Unknown | 21,385/yr |
| Hokkaido | Hokkaido | Yunomi no Yu | Chloride Spring Sodium strong chloride spring (chloride spring) | 691/yr |
| Mie | Kinki | Yunoyama Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yunoyama Onsen, spread across the foot of Mt. Gozaisho. | Simple Thermal Spring Simple spring | — |
| Kumamoto | Kyushu & Okinawa | Yurakkusu | Unknown | 2,946/yr |
| Nagano | Chubu | Yurakukan | Unknown | 1,422/yr |
| Kochi | Shikoku | Yusuhara Onsen Matsurikan Editor's Pick A day-use hot spring facility in Yusuhara Town. | Simple Thermal Spring Simple spring | — |
| Yamagata | Tohoku | Zao Onsen Grand Open-Air Bath Editor's Pick An open-air bath formed by damming a river, with a strongly acidic water known for a nearly 1,900-year history since the hot spring's founding. | Sulfur Spring Acidic, sulfur-bearing sulfate/chloride spring | 17,062/yr |
| Yamagata | Tohoku | Zao Onsen Kamiyu Communal Bathhouse Editor's Pick An old-style communal bathhouse maintained by local residents. | Sulfur Spring Acidic sulfur spring | — |
| Gifu | Chubu | Gero Onsen Shirasagi no Yu Editor's Pick A town-run communal bathhouse named for the White Heron legend, symbolic of Gero Onsen. | Simple Thermal Spring Alkaline simple spring | 42,197/yr |
| Saga | Kyushu & Okinawa | Siebold no Yu Editor's Pick The symbolic town-run communal bathhouse of Ureshino Onsen, known for its silky 'beautiful-skin' water. | Simple Thermal Spring Alkaline simple spring | 17,775/yr |
| Ishikawa | Chubu | Soyu Editor's Pick The communal bathhouse at the heart of Yamashiro Onsen, symbolic of this historic hot spring representative of the Hokuriku region. | Simple Thermal Spring Alkaline simple spring | 16,694/yr |
| Ehime | Shikoku | Dogo Onsen Honkan Editor's Pick The symbolic wooden communal bathhouse of Dogo Onsen, whose history spans 3,000 years and which is associated with Natsume Soseki (an Important Cultural Property of Japan). | Simple Thermal Spring Alkaline simple spring | 14,990/yr |
| Okayama | Chugoku | Sunayu Editor's Pick A free mixed-bathing open-air bath welling up on the riverbank of the Asahi River, one of the finest in western Japan and symbolic of Yubara Onsen. | Simple Thermal Spring Simple spring | 10,837/yr |
| Yamanashi | Chubu | Hottarakashi Onsen | Simple Thermal Spring Simple spring | 10,703/yr |
| Kanagawa | Kanto | Nanasawa Onsen | Simple Thermal Spring Simple spring | 5,933/yr |
| Tokyo | Kanto | Keio Takaosan Onsen | Simple Thermal Spring Alkaline simple spring | 4,868/yr |
| Kanagawa | Kanto | Iiyama Onsen | Simple Thermal Spring Simple spring | 4,028/yr |
| Aichi | Chubu | Yukichiro | Simple Thermal Spring Weakly alkaline simple spring | 3,317/yr |
| Nagano | Chubu | Hakuba Happo Onsen | Simple Thermal Spring Alkaline simple spring | 3,097/yr |
| Yamanashi | Chubu | Yoshinoike Onsen | Simple Thermal Spring Simple spring | 2,399/yr |
| Nagano | Chubu | Azumino Shakunage no Yu | Simple Thermal Spring Simple spring | 2,060/yr |
| Saitama | Kanto | Sawarabi no Yu | Simple Thermal Spring Alkaline simple spring | 1,862/yr |
| Ehime | Shikoku | Higashi-Dogo Sora to Mori | Simple Thermal Spring Alkaline simple spring | 1,661/yr |
| Yamanashi | Chubu | Tsuzumigawa Onsen | Simple Thermal Spring Simple spring | 1,551/yr |
| Toyama | Chubu | Nukumori no Sato | Simple Thermal Spring Simple spring | 1,510/yr |
| Shizuoka | Chubu | Fugaku Onsen Hana no Yu | Simple Thermal Spring Simple spring | 1,276/yr |
| Gunma | Kanto | Hana no Eki Katashina Hanasaki no Yu | Simple Thermal Spring Alkaline simple spring | 1,168/yr |
| Tochigi | Kanto | Nikko City Yunishigawa Mizu no Sato | Simple Thermal Spring Simple spring | 1,142/yr |
| Yamanashi | Chubu | Hayabusa Onsen | Simple Thermal Spring Simple spring | 1,082/yr |
| Toyama | Chubu | Natural Hot Spring Kaze no Mori | Simple Thermal Spring Simple spring | 858/yr |
| Niigata | Chubu | Kandachi no Yu | Simple Thermal Spring Alkaline simple spring | 563/yr |
| Toyama | Chubu | Unazuki Yu no Eki Editor's Pick A day-use bathing facility in Unazuki Onsen, serving as a base for sightseeing in the Kurobe Gorge. | Simple Thermal Spring Simple spring | — |
| Tokyo | Kanto | Okutama Onsen Moegi no Yu Editor's Pick A day-use hot spring facility near Lake Okutama, a rarity within central Tokyo. | Simple Thermal Spring Alkaline simple spring | — |
| Ehime | Shikoku | Dogo Onsen Annex Asuka no Yuzen Editor's Pick A newer outer bathhouse next to Dogo Onsen Honkan, built with an Asuka-period motif. | Simple Thermal Spring Alkaline simple spring | — |
| Kanagawa | Kanto | Tenzan Tojikyo Editor's Pick A day-use hot spring facility in a traditional farmhouse style near Hakone-Yumoto, known for its open-air rock bath. | Simple Thermal Spring Simple spring | — |
| Saitama | Kanto | Chichibu Onsen Mangan no Yu Editor's Pick A day-use hot spring facility in the Chichibu area. | Simple Thermal Spring Alkaline simple spring | — |
| Yamanashi | Chubu | Isawa Onsen Sakura Onsenkan Editor's Pick A day-use hot spring facility run by Fuefuki City, using spring water from Isawa Onsen. | Simple Thermal Spring Alkaline simple spring | — |
| Fukushima | Tohoku | Sabako-yu Editor's Pick The symbolic wooden communal bathhouse of Iizaka Onsen, considered one of Japan's Three Ancient Hot Springs. | Simple Thermal Spring Simple spring | — |
| Ibaraki | Kanto | Okukuji Daigo no Yu Editor's Pick A town-run day-use hot spring facility in the Okukuji Onsen area. | Simple Thermal Spring Simple spring | — |
| Aichi | Chubu | Sanage Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in the Sanage Onsen area. | Simple Thermal Spring Simple spring | — |
| Mie | Kinki | Yunoyama Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yunoyama Onsen, spread across the foot of Mt. Gozaisho. | Simple Thermal Spring Simple spring | — |
| Kyoto | Kinki | Kurama Onsen Editor's Pick An open-air day-bathing facility partway up Mt. Kurama, a quiet spring away from central Kyoto. | Simple Thermal Spring Alkaline simple spring | — |
| Hiroshima | Chugoku | Yuki Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yuki Onsen, on the outskirts of Hiroshima city. | Simple Thermal Spring Simple spring | — |
| Kumamoto | Kyushu & Okinawa | Kurokawa Onsen Ikoi no Ie Editor's Pick A town-run day-use bathing facility in Kurokawa Onsen. | Simple Thermal Spring Simple spring | — |
| Iwate | Tohoku | Dai Onsen Communal Bathhouse Editor's Pick A locally managed communal bathhouse passed down in Dai Onsen, part of the Hanamaki Minami Onsen valley. | Simple Thermal Spring Simple spring | — |
| Shiga | Kinki | Katata Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Katata, on the shore of Lake Biwa. | Simple Thermal Spring Simple spring | — |
| Osaka | Kinki | Minoh Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in the Minoh Onsen area, known for Minoh Falls. | Simple Thermal Spring Simple spring | — |
| Nara | Kinki | Dorogawa Onsen Center Editor's Pick A day-use bathing facility in the Dorogawa Onsen area at the foot of Mt. Omine. | Simple Thermal Spring Simple spring | — |
| Yamaguchi | Chugoku | Yuda Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yuda Onsen, welling up in the center of Yamaguchi City. | Simple Thermal Spring Simple spring | — |
| Kochi | Shikoku | Yusuhara Onsen Matsurikan Editor's Pick A day-use hot spring facility in Yusuhara Town. | Simple Thermal Spring Simple spring | — |
| Hyogo | Kinki | Kin no Yu (Gold Bath) Editor's Pick A communal bathhouse run by the city of Kobe. The iconic outer bath of Arima Onsen, where visitors can easily enjoy the reddish-brown 'gold spring' water. | Chloride Spring Iron-bearing sodium – strong chloride spring | 73,619/yr |
| Akita | Tohoku | Tamagawa Onsen Grand Bath Editor's Pick Known for its strongly acidic water at around pH 1.2, one of the most acidic in Japan, drawing therapeutic bathers ('toji') from across the country; day bathing available. | Chloride Spring Acidic, iron(II)-bearing aluminum – sulfate/chloride spring | 34,997/yr |
| Shizuoka | Chubu | Yamada-yu Editor's Pick A neighborhood public bathhouse using spring water from Atami Onsen, well loved by locals. | Chloride Spring Sodium – chloride spring | 16,974/yr |
| Kagoshima | Kyushu & Okinawa | Sunamushi Kaikan Sarakku Editor's Pick A facility symbolic of Ibusuki Onsen, offering the rare natural sand-steam bath experience found almost nowhere else in the world. | Chloride Spring Sodium – chloride spring | 10,406/yr |
| Tokyo | Kanto | Toshimaen Niwa no Yu | Chloride Spring Sodium – strong chloride spring | 7,194/yr |
| Niigata | Chubu | Niitsu Onsen | Chloride Spring Iodine-bearing sodium – chloride/bicarbonate spring | 4,651/yr |
| Gunma | Kanto | Usui Pass Forest Park Exchange Hall 'Toge no Yu' | Chloride Spring Sodium – bicarbonate/chloride spring | 3,899/yr |
| Yamagata | Tohoku | Dohmeki Onsen | Chloride Spring Sodium strong chloride spring | 3,725/yr |
| Tokyo | Kanto | Spagium Japon | Chloride Spring Sodium – chloride/bicarbonate spring | 2,597/yr |
| Saitama | Kanto | Saitama Seikanji Onsen | Chloride Spring Chloride spring | 2,590/yr |
| Yamagata | Tohoku | Ringo Onsen (Apple Onsen) | Chloride Spring Sodium – strong chloride spring | 2,046/yr |
| Hyogo | Kinki | Nada Onsen | Chloride Spring Sodium – bicarbonate/chloride low-temperature spring | 2,015/yr |
| Toyama | Chubu | Funahashi Tateyama Natural Hot Spring Yumegokochi | Chloride Spring Sodium strong chloride spring | 2,000/yr |
| Hokkaido | Hokkaido | Nagomi no Yu | Chloride Spring Sodium – strong chloride spring (hypertonic, weakly alkaline, high-temperature) | 1,573/yr |
| Saitama | Kanto | Mori no Seseragi Nagomi | Chloride Spring Sodium – chloride spring | 1,220/yr |
| Mie | Kinki | Kuwana Natural Hot Spring | Chloride Spring Sodium – chloride spring | 1,183/yr |
| Yamagata | Tohoku | Kahoku Onsen | Chloride Spring Sodium – chloride spring | 1,160/yr |
| Toyama | Chubu | Natural Hot Spring Kaio | Chloride Spring Strong chloride spring | 1,155/yr |
| Hokkaido | Hokkaido | Bifuka Onsen | Chloride Spring Chloride spring / bicarbonate spring | 1,147/yr |
| Hokkaido | Hokkaido | New Chitose Airport Onsen | Chloride Spring Sodium – chloride spring | 1,138/yr |
| Tochigi | Kanto | Nasu-Shiobara Ekimae Onsen | Chloride Spring Sodium/calcium chloride spring | 1,124/yr |
| Toyama | Chubu | Horinji Onsen | Chloride Spring Sodium – sulfate/chloride spring (hypotonic, alkaline, high-temperature) | 979/yr |
| Gifu | Chubu | Shirakawa-go no Yu | Chloride Spring Sodium – chloride mineral spring | 968/yr |
| Shizuoka | Chubu | Itawari no Yu | Chloride Spring Sodium – chloride/bicarbonate spring (hypotonic, alkaline, low-temperature) | 835/yr |
| Toyama | Chubu | Taikoyama Natural Hot Spring Taiko no Yu | Chloride Spring Sodium – strong chloride spring | 821/yr |
| Wakayama | Kinki | Saki no Yu Editor's Pick An outer bath of Shirahama Onsen, one of Japan's oldest hot springs, known for its open-air bath overlooking the Pacific Ocean. | Chloride Spring Sodium – chloride spring | 811/yr |
| Hokkaido | Hokkaido | Yunomi no Yu | Chloride Spring Sodium strong chloride spring (chloride spring) | 691/yr |
| Miyagi | Tohoku | Ayashi Tenku no Yu Soyogi no Mori | Chloride Spring Chloride spring | 550/yr |
| Hyogo | Kinki | Kato City Takino Exchange & Wellness Center | Chloride Spring Chloride spring (contains calcium, sodium and chloride ions, etc.) | 474/yr |
| Nagano | Chubu | Shibu Onsen Oyu Editor's Pick The central communal bathhouse of Shibu Onsen's 'nine-bath pilgrimage,' a symbol of its outdoor-bathhouse culture. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Nagano | Chubu | Shibu Onsen Ichiban-yu Hatsuyu Editor's Pick Regarded as the first bath of the nine-bath pilgrimage, a communal bathhouse. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Saitama | Kanto | Hyakkannon Onsen Editor's Pick Free-flowing source water derived from fossil seawater, given top ratings for water quality and supply method by the Japan Spa Association and others. | Chloride Spring Sodium – strong chloride spring | — |
| Gunma | Kanto | Sainokawara Open-Air Bath Editor's Pick A vast open-air bath within Sainokawara Park. | Chloride Spring Acidic – chloride/sulfate spring | — |
| Chiba | Kanto | Iwai Yuki no Yu Editor's Pick A day-use hot spring facility in the Minami-Boso Onsen area. | Chloride Spring Sodium – chloride spring | — |
| Fukui | Chubu | Saint Pia Awara Editor's Pick A town-run day-use hot spring facility at the heart of Awara Onsen. | Chloride Spring Sodium – chloride spring | — |
| Shimane | Chugoku | Tamatsukuri Onsen Yu-yu Editor's Pick A town-run day-use hot spring facility in the Tamatsukuri Onsen district. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Fukuoka | Kyushu & Okinawa | Harazuru Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Harazuru Onsen, spread along the Chikugo River. | Chloride Spring Sodium – chloride spring | — |
| Okinawa | Kyushu & Okinawa | Yuinchi Nanjo Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in Nanjo City, Okinawa Prefecture. | Chloride Spring Sodium – strong chloride spring | — |
| Tokushima | Shikoku | Minami-Awa Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in the Minami-Awa Onsen area of southern Tokushima Prefecture. | Chloride Spring Sodium – chloride spring | — |
| Kagawa | Shikoku | Konpira Onsen Village Day-Bathing Facility Editor's Pick A day-use bathing facility in Konpira Onsen Village, the approach town to Kotohira-gu Shrine. | Chloride Spring Sodium – chloride spring | — |
| Gifu | Chubu | Nakatsugawa Onsen Kur Resort Yufunesawa | Bicarbonate Spring Sodium bicarbonate spring (baking-soda spring) | 2,320/yr |
| Tochigi | Kanto | Tochigi Onsen Yuraku no Sato | Bicarbonate Spring Bicarbonate spring (baking-soda spring) | 691/yr |
| Kanagawa | Kanto | Tsunashima Gensen Yukemuri no Sho Editor's Pick A complex of natural hot-spring baths and stone saunas, known for its dark-brown water and the carbonated 'Tansan Kohaku-yu' (carbonated amber bath). | Bicarbonate Spring Sodium – bicarbonate cold mineral spring | — |
| Kanagawa | Kanto | Miyamaedaira Gensen Yukemuri no Sho Editor's Pick A complex of natural hot-spring baths and stone saunas, known for its dark-brown water. | Bicarbonate Spring Sodium – bicarbonate spring | — |
| Hokkaido | Hokkaido | Nagareyama Onsen | Sulfate Spring Sodium/calcium – sulfate spring | 4,674/yr |
| Yamagata | Tohoku | Yanagawa Onsen | Sulfate Spring Sulfate spring | 1,260/yr |
| Aomori | Tohoku | Sukayu Onsen Hiba Senninburo Editor's Pick Famous for its huge mixed-bathing hall built entirely of Hiba cypress; a renowned hot spring of the Hakkoda mountains open for day bathing, and Japan's first-designated National Health Resort. | Sulfur Spring Acidic, sulfur-bearing aluminum/iron(II) – sulfate/chloride spring | 46,295/yr |
| Aomori | Tohoku | Sukayu | Sulfur Spring Acidic sulfur spring | 46,295/yr |
| Miyagi | Tohoku | Waseda Sajikiyu Editor's Pick A day-use bathing facility representative of the Naruko Onsen area, built after research into the local spring sources conducted by Waseda University students. | Sulfur Spring Sulfur-bearing sodium – sulfate/chloride spring | 18,941/yr |
| Yamagata | Tohoku | Zao Onsen Grand Open-Air Bath Editor's Pick An open-air bath formed by damming a river, with a strongly acidic water known for a nearly 1,900-year history since the hot spring's founding. | Sulfur Spring Acidic, sulfur-bearing sulfate/chloride spring | 17,062/yr |
| Tochigi | Kanto | Shiobara Onsen Villages | Sulfur Spring Sulfur, acidic, sulfate, chloride, bicarbonate and simple springs | 10,416/yr |
| Tochigi | Kanto | Shika no Yu Editor's Pick A communal bathhouse with over 1,300 years of history, the birthplace of Nasu Onsen, lined with several baths of differing temperatures. | Sulfur Spring Sulfur-bearing calcium/sodium – sulfate/chloride spring | 8,417/yr |
| Aomori | Tohoku | Kintaro Onsen (Aomori) | Sulfur Spring Sulfur-bearing sodium/calcium chloride spring (hydrogen-sulfide type) | 764/yr |
| Hokkaido | Hokkaido | Yumemoto Sagiri-yu Editor's Pick A day-use bathing facility in the center of Noboribetsu Onsen town, offering the sulfur spring that is one of Noboribetsu's most representative water types among its many mineral springs. | Sulfur Spring Acidic sulfur spring | — |
| Nagano | Chubu | Nozawa Onsen Oyu Editor's Pick The central communal bathhouse of Nozawa Onsen's '13 outdoor baths' circuit, a symbol of the town with Edo-period architecture. | Sulfur Spring Simple sulfur spring | — |
| Nagano | Chubu | Nozawa Onsen Asagama-no-yu Editor's Pick A communal bathhouse beside Asagama, the town's source-spring site known for its near-90°C water. | Sulfur Spring Sulfur-bearing sodium/calcium – sulfate spring | — |
| Yamagata | Tohoku | Zao Onsen Kamiyu Communal Bathhouse Editor's Pick An old-style communal bathhouse maintained by local residents. | Sulfur Spring Acidic sulfur spring | — |
| Gunma | Kanto | Otaki no Yu Editor's Pick A day-use bathing facility representative of Kusatsu Onsen, known for its 'awase-yu' method of gradually acclimating bathers to the hot water temperature. | Sulfur Spring Acidic sulfur spring | — |
| Gunma | Kanto | Manza Onsen Nisshinkan Editor's Pick A long-established inn with three bathing areas and milky-white water, welling up at 1,800 m with one of the highest sulfur concentrations in Japan. | Sulfur Spring Acidic, sulfur-bearing magnesium/sodium – sulfate spring | — |
| Niigata | Chubu | Yama no Yu Editor's Pick A communal bathhouse in Echigo-Yuzawa Onsen, an old-style bathhouse used by locals and travelers alike. | Sulfur Spring Simple sulfur spring | — |
| Miyagi | Tohoku | Takinoyu Editor's Pick A communal bathhouse with a thousand-year history as the sacred water of Naruko Onsen Shrine. | Sulfur Spring Sulfur-bearing sodium/aluminum/calcium/iron(II) – sulfate spring | — |
| Nagasaki | Kyushu & Okinawa | Kojigoku Onsenkan Editor's Pick A day-use bathing facility near Unzen Jigoku, known for its milky-white sulfur spring. | Sulfur Spring Acidic sulfur spring | — |
| Toyama | Chubu | Inari Mineral Spring | Iron Spring Alkaline (contains iron) | 984/yr |
| Hyogo | Kinki | Gin no Yu (Silver Bath) Editor's Pick Also run by the city of Kobe, this communal bathhouse offers the clear, colorless 'silver spring' (a carbonated, radium-bearing spring). | Radium Spring Radon spring (carbonated spring) | 73,619/yr |
| Tottori | Chugoku | Misasa Onsen Kawara-buro Editor's Pick A free open-air bath on the riverbank of the Mitoku River, symbolic of Misasa Onsen, known for having some of the highest radon content in the world. | Radium Spring Radioactive spring (radon spring) | 26,558/yr |
| Hyogo | Kinki | Hana no Yu | Radium Spring Simple weakly radioactive cold mineral spring (weakly alkaline, drinkable) | 1,607/yr |
| Miyagi | Tohoku | Onagawa Onsen Yupoppo | Other Hypotonic alkaline spring | 2,941/yr |
| Kanagawa | Kanto | Manten no Yu (Yokohama) A mineral spring meeting the standards of Japan's Hot Spring Act. | Other (Mineral spring meeting the Hot Springs Act standard) | 2,075/yr |
| Ehime | Shikoku | Tsubaki Exchange Hall Tsubaki Onsen Komatsu | Other Hypotonic, weakly alkaline, low-temperature spring | 1,368/yr |
| Ehime | Shikoku | Shimanami Onsen Kisuke no Yu | Other Hypertonic, weakly alkaline, low-temperature spring | 1,301/yr |
| Yamagata | Tohoku | Mamurogawa Onsen Bairien | Other Sodium chloride spring | 1,275/yr |
| Okinawa | Kyushu & Okinawa | Natural Hot Spring Aroma | Other Iodine-bearing salt spring | 937/yr |
| Fukushima | Tohoku | Spa Resort Hawaiians | Unknown | 73,532/yr |
| Tokyo | Kanto | Hanakei no Yu | Unknown | 72,143/yr |
| Yamanashi | Chubu | Fujiyama Onsen | Unknown | 62,746/yr |
| Tokyo | Kanto | Kur Garden (Tama Tech) | Unknown | 58,403/yr |
| Kanagawa | Kanto | Lake Sagami MORI MORI | Unknown | 30,555/yr |
| Kanagawa | Kanto | Yunessun | Unknown | 21,385/yr |
| Hiroshima | Chugoku | Miroku no Sato | Unknown | 18,442/yr |
| Iwate | Tohoku | Hotto Yuda | Unknown | 18,093/yr |
| Kyoto | Kinki | Kasagi Onsen | Unknown | 15,892/yr |
| Tokyo | Kanto | Spa LaQua | Unknown | 11,137/yr |
| Tokyo | Kanto | LaQua | Unknown | 11,137/yr |
| Nagano | Chubu | Katakurakan | Unknown | 11,014/yr |
| Mie | Kinki | Yuami no Shima | Unknown | 10,538/yr |
| Chiba | Kanto | Oedo Onsen Monogatari Urayasu Mangekyo | Unknown | 7,478/yr |
| Chiba | Kanto | Yumeguri Mangekyo | Unknown | 7,478/yr |
| Akita | Tohoku | Quince Moriyoshi | Unknown | 6,804/yr |
| Hyogo | Kinki | Taiko no Yu | Unknown | 6,299/yr |
| Tokyo | Kanto | Thermae-yu | Unknown | 5,995/yr |
| Oita | Kyushu & Okinawa | Keirin Onsen | Unknown | 5,451/yr |
| Oita | Kyushu & Okinawa | Takegawara Onsen Editor's Pick Founded in 1879, the city-run communal bathhouse representative of Beppu Onsen, also famous for its sand-bath treatments. | Unknown | 5,063/yr |
| Ehime | Shikoku | Kisuke Box | Unknown | 4,687/yr |
| Shiga | Kinki | Agaryanse | Unknown | 4,518/yr |
| Fukui | Chubu | Tsuruga Kirameki Onsen Rela Port | Unknown | 3,611/yr |
| Hyogo | Kinki | Nature Spa Takarazuka | Unknown | 3,462/yr |
| Tokyo | Kanto | Kabe Onsen | Unknown | 3,168/yr |
| Shimane | Chugoku | Izumo Iris no Oka | Unknown | 3,104/yr |
| Kumamoto | Kyushu & Okinawa | Yurakkusu | Unknown | 2,946/yr |
| Tokyo | Kanto | Akigawa Valley Seotonoyu | Unknown | 2,677/yr |
| Saitama | Kanto | Onsen Balcony King & Queen | Unknown | 2,597/yr |
| Saitama | Kanto | Hanawaraku no Yu | Unknown | 2,437/yr |
| Akita | Tohoku | Hachimori Isaribi Onsen Hatahata-kan | Unknown | 2,422/yr |
| Kanagawa | Kanto | Kabutoyu Onsen Sansuiro | Unknown | 2,355/yr |
| Hiroshima | Chugoku | Kagura Monzen Tojimura | Unknown | 2,252/yr |
| Tochigi | Kanto | Oyama Omoigawa Onsen | Unknown | 2,230/yr |
| Oita | Kyushu & Okinawa | Hamawaki Onsen | Unknown | 2,217/yr |
| Ishikawa | Chubu | Bird Humming Torigoe | Unknown | 2,156/yr |
| Ishikawa | Chubu | Tedori Onsen | Unknown | 2,156/yr |
| Oita | Kyushu & Okinawa | Beppu Kaihin Sunayu (Beach Sand Bath) | Unknown | 2,112/yr |
| Ibaraki | Kanto | Tsukuba Wellness Park | Unknown | 2,080/yr |
| Kumamoto | Kyushu & Okinawa | Sakura-yu | Unknown | 2,052/yr |
| Shizuoka | Chubu | Marine Spa Atami | Unknown | 2,030/yr |
| Fukushima | Tohoku | Koriyama Yuraxx Atami | Unknown | 1,989/yr |
| Saga | Kyushu & Okinawa | Takeo Onsen Shinkan | Unknown | 1,959/yr |
| Chiba | Kanto | Clean Spa Ichikawa | Unknown | 1,907/yr |
| Hokkaido | Hokkaido | Eniwa no Yu | Unknown | 1,899/yr |
| Hokkaido | Hokkaido | Eniwa Onsen La Foret | Unknown | 1,899/yr |
| Tokyo | Kanto | Murayama Onsen Katakuri no Yu | Unknown | 1,819/yr |
| Shizuoka | Chubu | Hanasaki no Yu | Unknown | 1,777/yr |
| Hokkaido | Hokkaido | Wakkanai Natural Hot Spring Minato no Yu | Unknown | 1,768/yr |
| Hokkaido | Hokkaido | Kamuidake Onsen | Unknown | 1,756/yr |
| Oita | Kyushu & Okinawa | Hyotan Onsen | Unknown | 1,681/yr |
| Kyoto | Kinki | Refre Kayanosato | Unknown | 1,668/yr |
| Hokkaido | Hokkaido | Muroran Onsen Yurara | Unknown | 1,616/yr |
| Oita | Kyushu & Okinawa | Kannawa Mushiyu (Steam Bath) | Unknown | 1,604/yr |
| Kanagawa | Kanto | Kozoji Onsen Gyokusuiro | Unknown | 1,573/yr |
| Oita | Kyushu & Okinawa | Furo-sen | Unknown | 1,539/yr |
| Nagano | Chubu | Tatsushima Onsen Seseragi no Yu | Unknown | 1,489/yr |
| Nagano | Chubu | Yurakukan | Unknown | 1,422/yr |
| Toyama | Chubu | Yumedokoro Unazuki | Unknown | 1,414/yr |
| Tochigi | Kanto | Spa Resort Rib Max | Unknown | 1,351/yr |
| Ehime | Shikoku | Mare Grazia Omishima | Unknown | 1,246/yr |
| Ehime | Shikoku | Riraku | Unknown | 1,201/yr |
| Nagano | Chubu | Suzumushi-so | Unknown | 1,176/yr |
| Ehime | Shikoku | Nibukawa Seseragi Exchange Hall | Unknown | 1,140/yr |
| Ibaraki | Kanto | Ukuraku no Yu Jiuo | Unknown | 1,131/yr |
| Toyama | Chubu | Ushidake Onsen Health Center | Unknown | 1,047/yr |
| Hyogo | Kinki | Kitamaekan | Unknown | 980/yr |
| Oita | Kyushu & Okinawa | Kusu Onsen | Unknown | 972/yr |
| Hokkaido | Hokkaido | Rakuraku Onsen | Unknown | 966/yr |
| Toyama | Chubu | Asahi Town Environmental Exchange Facility Rakuchi-no | Unknown | 949/yr |
| Yamagata | Tohoku | Himawari Onsen Yu-ra-ra | Unknown | 937/yr |
| Hyogo | Kinki | Nanakama Onsen Yurakukan | Unknown | 903/yr |
| Niigata | Chubu | Senju Onsen Sennen no Yu | Unknown | 896/yr |
| Shizuoka | Chubu | Yu Trio | Unknown | 858/yr |
| Shizuoka | Chubu | Shimada City Tashiro no Sato Onsen Itawari no Yu | Unknown | 835/yr |
| Gunma | Kanto | Takayama Onsen Fureai Plaza | Unknown | 833/yr |
| Aichi | Chubu | Higashiura Hana no Yu | Unknown | 782/yr |
| Nagasaki | Kyushu & Okinawa | Iimori Tsuki no Oka Onsen | Unknown | 764/yr |
| Gunma | Kanto | Takayama Onsen | Unknown | 669/yr |
| Nagano | Chubu | Yu-furu Tanaka | Unknown | 656/yr |
| Fukushima | Tohoku | Sunny Land Konan | Unknown | 656/yr |
| Tottori | Chugoku | Minato Onsen Honokami | Unknown | 573/yr |
| Tottori | Chugoku | Minato Onsenkan | Unknown | 573/yr |
| Nagano | Chubu | Nakano City Toyota Onsen Park Momiji-so | Unknown | 518/yr |
| Toyama | Chubu | 37BASE | Unknown | 502/yr |
| Saitama | Kanto | 100 no Yu | Unknown | 499/yr |
| Toyama | Chubu | Onuma Experience & Exchange Facility Tochi no Yu | Unknown | 487/yr |
| Hokkaido | Hokkaido | Bogaku no Yu | Unknown | 453/yr |
| Toyama | Chubu | Grand Spa Kanoen | Unknown | 323/yr |
| Toyama | Chubu | Nanto City Iguchi Experience & Exchange Center Yu-yu Land Hanatsubaki | Unknown | 256/yr |
| Ishikawa | Chubu | Health Promotion Center Athlon | Unknown | 255/yr |
| Toyama | Chubu | Inami Exchange Hall La Foret | Unknown | 231/yr |
| Fukuoka | Kyushu & Okinawa | Shiraito no Yu | Unknown | 195/yr |
| Toyama | Chubu | Spa Alps | Unknown | 175/yr |
| Miyazaki | Kyushu & Okinawa | Ebino Kogen Onsen Communal Bathhouse Editor's Pick A day-use bathing facility on the Ebino Plateau in the Kirishima mountain range. | Unknown | — |
| Hokkaido | ||||
| Hokkaido | Hokkaido | Nagareyama Onsen | Sulfate Spring Sodium/calcium – sulfate spring | 4,674/yr |
| Hokkaido | Hokkaido | Eniwa no Yu | Unknown | 1,899/yr |
| Hokkaido | Hokkaido | Eniwa Onsen La Foret | Unknown | 1,899/yr |
| Hokkaido | Hokkaido | Wakkanai Natural Hot Spring Minato no Yu | Unknown | 1,768/yr |
| Hokkaido | Hokkaido | Kamuidake Onsen | Unknown | 1,756/yr |
| Hokkaido | Hokkaido | Muroran Onsen Yurara | Unknown | 1,616/yr |
| Hokkaido | Hokkaido | Nagomi no Yu | Chloride Spring Sodium – strong chloride spring (hypertonic, weakly alkaline, high-temperature) | 1,573/yr |
| Hokkaido | Hokkaido | Bifuka Onsen | Chloride Spring Chloride spring / bicarbonate spring | 1,147/yr |
| Hokkaido | Hokkaido | New Chitose Airport Onsen | Chloride Spring Sodium – chloride spring | 1,138/yr |
| Hokkaido | Hokkaido | Rakuraku Onsen | Unknown | 966/yr |
| Hokkaido | Hokkaido | Yunomi no Yu | Chloride Spring Sodium strong chloride spring (chloride spring) | 691/yr |
| Hokkaido | Hokkaido | Bogaku no Yu | Unknown | 453/yr |
| Hokkaido | Hokkaido | Yumemoto Sagiri-yu Editor's Pick A day-use bathing facility in the center of Noboribetsu Onsen town, offering the sulfur spring that is one of Noboribetsu's most representative water types among its many mineral springs. | Sulfur Spring Acidic sulfur spring | — |
| Tohoku | ||||
| Aomori | Tohoku | Sukayu Onsen Hiba Senninburo Editor's Pick Famous for its huge mixed-bathing hall built entirely of Hiba cypress; a renowned hot spring of the Hakkoda mountains open for day bathing, and Japan's first-designated National Health Resort. | Sulfur Spring Acidic, sulfur-bearing aluminum/iron(II) – sulfate/chloride spring | 46,295/yr |
| Aomori | Tohoku | Sukayu | Sulfur Spring Acidic sulfur spring | 46,295/yr |
| Aomori | Tohoku | Kintaro Onsen (Aomori) | Sulfur Spring Sulfur-bearing sodium/calcium chloride spring (hydrogen-sulfide type) | 764/yr |
| Iwate | Tohoku | Hotto Yuda | Unknown | 18,093/yr |
| Iwate | Tohoku | Dai Onsen Communal Bathhouse Editor's Pick A locally managed communal bathhouse passed down in Dai Onsen, part of the Hanamaki Minami Onsen valley. | Simple Thermal Spring Simple spring | — |
| Miyagi | Tohoku | Waseda Sajikiyu Editor's Pick A day-use bathing facility representative of the Naruko Onsen area, built after research into the local spring sources conducted by Waseda University students. | Sulfur Spring Sulfur-bearing sodium – sulfate/chloride spring | 18,941/yr |
| Miyagi | Tohoku | Takinoyu Editor's Pick A communal bathhouse with a thousand-year history as the sacred water of Naruko Onsen Shrine. | Sulfur Spring Sulfur-bearing sodium/aluminum/calcium/iron(II) – sulfate spring | — |
| Miyagi | Tohoku | Onagawa Onsen Yupoppo | Other Hypotonic alkaline spring | 2,941/yr |
| Miyagi | Tohoku | Ayashi Tenku no Yu Soyogi no Mori | Chloride Spring Chloride spring | 550/yr |
| Akita | Tohoku | Tamagawa Onsen Grand Bath Editor's Pick Known for its strongly acidic water at around pH 1.2, one of the most acidic in Japan, drawing therapeutic bathers ('toji') from across the country; day bathing available. | Chloride Spring Acidic, iron(II)-bearing aluminum – sulfate/chloride spring | 34,997/yr |
| Akita | Tohoku | Quince Moriyoshi | Unknown | 6,804/yr |
| Akita | Tohoku | Hachimori Isaribi Onsen Hatahata-kan | Unknown | 2,422/yr |
| Yamagata | Tohoku | Zao Onsen Grand Open-Air Bath Editor's Pick An open-air bath formed by damming a river, with a strongly acidic water known for a nearly 1,900-year history since the hot spring's founding. | Sulfur Spring Acidic, sulfur-bearing sulfate/chloride spring | 17,062/yr |
| Yamagata | Tohoku | Dohmeki Onsen | Chloride Spring Sodium strong chloride spring | 3,725/yr |
| Yamagata | Tohoku | Ringo Onsen (Apple Onsen) | Chloride Spring Sodium – strong chloride spring | 2,046/yr |
| Yamagata | Tohoku | Mamurogawa Onsen Bairien | Other Sodium chloride spring | 1,275/yr |
| Yamagata | Tohoku | Yanagawa Onsen | Sulfate Spring Sulfate spring | 1,260/yr |
| Yamagata | Tohoku | Kahoku Onsen | Chloride Spring Sodium – chloride spring | 1,160/yr |
| Yamagata | Tohoku | Himawari Onsen Yu-ra-ra | Unknown | 937/yr |
| Yamagata | Tohoku | Zao Onsen Kamiyu Communal Bathhouse Editor's Pick An old-style communal bathhouse maintained by local residents. | Sulfur Spring Acidic sulfur spring | — |
| Fukushima | Tohoku | Spa Resort Hawaiians | Unknown | 73,532/yr |
| Fukushima | Tohoku | Koriyama Yuraxx Atami | Unknown | 1,989/yr |
| Fukushima | Tohoku | Sunny Land Konan | Unknown | 656/yr |
| Fukushima | Tohoku | Sabako-yu Editor's Pick The symbolic wooden communal bathhouse of Iizaka Onsen, considered one of Japan's Three Ancient Hot Springs. | Simple Thermal Spring Simple spring | — |
| Kanto | ||||
| Ibaraki | Kanto | Tsukuba Wellness Park | Unknown | 2,080/yr |
| Ibaraki | Kanto | Ukuraku no Yu Jiuo | Unknown | 1,131/yr |
| Ibaraki | Kanto | Okukuji Daigo no Yu Editor's Pick A town-run day-use hot spring facility in the Okukuji Onsen area. | Simple Thermal Spring Simple spring | — |
| Tochigi | Kanto | Shiobara Onsen Villages | Sulfur Spring Sulfur, acidic, sulfate, chloride, bicarbonate and simple springs | 10,416/yr |
| Tochigi | Kanto | Shika no Yu Editor's Pick A communal bathhouse with over 1,300 years of history, the birthplace of Nasu Onsen, lined with several baths of differing temperatures. | Sulfur Spring Sulfur-bearing calcium/sodium – sulfate/chloride spring | 8,417/yr |
| Tochigi | Kanto | Oyama Omoigawa Onsen | Unknown | 2,230/yr |
| Tochigi | Kanto | Spa Resort Rib Max | Unknown | 1,351/yr |
| Tochigi | Kanto | Nikko City Yunishigawa Mizu no Sato | Simple Thermal Spring Simple spring | 1,142/yr |
| Tochigi | Kanto | Nasu-Shiobara Ekimae Onsen | Chloride Spring Sodium/calcium chloride spring | 1,124/yr |
| Tochigi | Kanto | Tochigi Onsen Yuraku no Sato | Bicarbonate Spring Bicarbonate spring (baking-soda spring) | 691/yr |
| Gunma | Kanto | Usui Pass Forest Park Exchange Hall 'Toge no Yu' | Chloride Spring Sodium – bicarbonate/chloride spring | 3,899/yr |
| Gunma | Kanto | Hana no Eki Katashina Hanasaki no Yu | Simple Thermal Spring Alkaline simple spring | 1,168/yr |
| Gunma | Kanto | Takayama Onsen Fureai Plaza | Unknown | 833/yr |
| Gunma | Kanto | Takayama Onsen | Unknown | 669/yr |
| Gunma | Kanto | Otaki no Yu Editor's Pick A day-use bathing facility representative of Kusatsu Onsen, known for its 'awase-yu' method of gradually acclimating bathers to the hot water temperature. | Sulfur Spring Acidic sulfur spring | — |
| Gunma | Kanto | Sainokawara Open-Air Bath Editor's Pick A vast open-air bath within Sainokawara Park. | Chloride Spring Acidic – chloride/sulfate spring | — |
| Gunma | Kanto | Manza Onsen Nisshinkan Editor's Pick A long-established inn with three bathing areas and milky-white water, welling up at 1,800 m with one of the highest sulfur concentrations in Japan. | Sulfur Spring Acidic, sulfur-bearing magnesium/sodium – sulfate spring | — |
| Saitama | Kanto | Onsen Balcony King & Queen | Unknown | 2,597/yr |
| Saitama | Kanto | Saitama Seikanji Onsen | Chloride Spring Chloride spring | 2,590/yr |
| Saitama | Kanto | Hanawaraku no Yu | Unknown | 2,437/yr |
| Saitama | Kanto | Sawarabi no Yu | Simple Thermal Spring Alkaline simple spring | 1,862/yr |
| Saitama | Kanto | Mori no Seseragi Nagomi | Chloride Spring Sodium – chloride spring | 1,220/yr |
| Saitama | Kanto | 100 no Yu | Unknown | 499/yr |
| Saitama | Kanto | Chichibu Onsen Mangan no Yu Editor's Pick A day-use hot spring facility in the Chichibu area. | Simple Thermal Spring Alkaline simple spring | — |
| Saitama | Kanto | Hyakkannon Onsen Editor's Pick Free-flowing source water derived from fossil seawater, given top ratings for water quality and supply method by the Japan Spa Association and others. | Chloride Spring Sodium – strong chloride spring | — |
| Chiba | Kanto | Oedo Onsen Monogatari Urayasu Mangekyo | Unknown | 7,478/yr |
| Chiba | Kanto | Yumeguri Mangekyo | Unknown | 7,478/yr |
| Chiba | Kanto | Clean Spa Ichikawa | Unknown | 1,907/yr |
| Chiba | Kanto | Iwai Yuki no Yu Editor's Pick A day-use hot spring facility in the Minami-Boso Onsen area. | Chloride Spring Sodium – chloride spring | — |
| Tokyo | Kanto | Hanakei no Yu | Unknown | 72,143/yr |
| Tokyo | Kanto | Kur Garden (Tama Tech) | Unknown | 58,403/yr |
| Tokyo | Kanto | Spa LaQua | Unknown | 11,137/yr |
| Tokyo | Kanto | LaQua | Unknown | 11,137/yr |
| Tokyo | Kanto | Toshimaen Niwa no Yu | Chloride Spring Sodium – strong chloride spring | 7,194/yr |
| Tokyo | Kanto | Thermae-yu | Unknown | 5,995/yr |
| Tokyo | Kanto | Keio Takaosan Onsen | Simple Thermal Spring Alkaline simple spring | 4,868/yr |
| Tokyo | Kanto | Kabe Onsen | Unknown | 3,168/yr |
| Tokyo | Kanto | Akigawa Valley Seotonoyu | Unknown | 2,677/yr |
| Tokyo | Kanto | Spagium Japon | Chloride Spring Sodium – chloride/bicarbonate spring | 2,597/yr |
| Tokyo | Kanto | Murayama Onsen Katakuri no Yu | Unknown | 1,819/yr |
| Tokyo | Kanto | Okutama Onsen Moegi no Yu Editor's Pick A day-use hot spring facility near Lake Okutama, a rarity within central Tokyo. | Simple Thermal Spring Alkaline simple spring | — |
| Kanagawa | Kanto | Lake Sagami MORI MORI | Unknown | 30,555/yr |
| Kanagawa | Kanto | Yunessun | Unknown | 21,385/yr |
| Kanagawa | Kanto | Nanasawa Onsen | Simple Thermal Spring Simple spring | 5,933/yr |
| Kanagawa | Kanto | Iiyama Onsen | Simple Thermal Spring Simple spring | 4,028/yr |
| Kanagawa | Kanto | Kabutoyu Onsen Sansuiro | Unknown | 2,355/yr |
| Kanagawa | Kanto | Manten no Yu (Yokohama) A mineral spring meeting the standards of Japan's Hot Spring Act. | Other (Mineral spring meeting the Hot Springs Act standard) | 2,075/yr |
| Kanagawa | Kanto | Kozoji Onsen Gyokusuiro | Unknown | 1,573/yr |
| Kanagawa | Kanto | Tenzan Tojikyo Editor's Pick A day-use hot spring facility in a traditional farmhouse style near Hakone-Yumoto, known for its open-air rock bath. | Simple Thermal Spring Simple spring | — |
| Kanagawa | Kanto | Tsunashima Gensen Yukemuri no Sho Editor's Pick A complex of natural hot-spring baths and stone saunas, known for its dark-brown water and the carbonated 'Tansan Kohaku-yu' (carbonated amber bath). | Bicarbonate Spring Sodium – bicarbonate cold mineral spring | — |
| Kanagawa | Kanto | Miyamaedaira Gensen Yukemuri no Sho Editor's Pick A complex of natural hot-spring baths and stone saunas, known for its dark-brown water. | Bicarbonate Spring Sodium – bicarbonate spring | — |
| Chubu | ||||
| Niigata | Chubu | Niitsu Onsen | Chloride Spring Iodine-bearing sodium – chloride/bicarbonate spring | 4,651/yr |
| Niigata | Chubu | Senju Onsen Sennen no Yu | Unknown | 896/yr |
| Niigata | Chubu | Kandachi no Yu | Simple Thermal Spring Alkaline simple spring | 563/yr |
| Niigata | Chubu | Yama no Yu Editor's Pick A communal bathhouse in Echigo-Yuzawa Onsen, an old-style bathhouse used by locals and travelers alike. | Sulfur Spring Simple sulfur spring | — |
| Toyama | Chubu | Funahashi Tateyama Natural Hot Spring Yumegokochi | Chloride Spring Sodium strong chloride spring | 2,000/yr |
| Toyama | Chubu | Nukumori no Sato | Simple Thermal Spring Simple spring | 1,510/yr |
| Toyama | Chubu | Yumedokoro Unazuki | Unknown | 1,414/yr |
| Toyama | Chubu | Natural Hot Spring Kaio | Chloride Spring Strong chloride spring | 1,155/yr |
| Toyama | Chubu | Ushidake Onsen Health Center | Unknown | 1,047/yr |
| Toyama | Chubu | Inari Mineral Spring | Iron Spring Alkaline (contains iron) | 984/yr |
| Toyama | Chubu | Horinji Onsen | Chloride Spring Sodium – sulfate/chloride spring (hypotonic, alkaline, high-temperature) | 979/yr |
| Toyama | Chubu | Asahi Town Environmental Exchange Facility Rakuchi-no | Unknown | 949/yr |
| Toyama | Chubu | Natural Hot Spring Kaze no Mori | Simple Thermal Spring Simple spring | 858/yr |
| Toyama | Chubu | Taikoyama Natural Hot Spring Taiko no Yu | Chloride Spring Sodium – strong chloride spring | 821/yr |
| Toyama | Chubu | 37BASE | Unknown | 502/yr |
| Toyama | Chubu | Onuma Experience & Exchange Facility Tochi no Yu | Unknown | 487/yr |
| Toyama | Chubu | Grand Spa Kanoen | Unknown | 323/yr |
| Toyama | Chubu | Nanto City Iguchi Experience & Exchange Center Yu-yu Land Hanatsubaki | Unknown | 256/yr |
| Toyama | Chubu | Inami Exchange Hall La Foret | Unknown | 231/yr |
| Toyama | Chubu | Spa Alps | Unknown | 175/yr |
| Toyama | Chubu | Unazuki Yu no Eki Editor's Pick A day-use bathing facility in Unazuki Onsen, serving as a base for sightseeing in the Kurobe Gorge. | Simple Thermal Spring Simple spring | — |
| Ishikawa | Chubu | Soyu Editor's Pick The communal bathhouse at the heart of Yamashiro Onsen, symbolic of this historic hot spring representative of the Hokuriku region. | Simple Thermal Spring Alkaline simple spring | 16,694/yr |
| Ishikawa | Chubu | Bird Humming Torigoe | Unknown | 2,156/yr |
| Ishikawa | Chubu | Tedori Onsen | Unknown | 2,156/yr |
| Ishikawa | Chubu | Health Promotion Center Athlon | Unknown | 255/yr |
| Fukui | Chubu | Tsuruga Kirameki Onsen Rela Port | Unknown | 3,611/yr |
| Fukui | Chubu | Saint Pia Awara Editor's Pick A town-run day-use hot spring facility at the heart of Awara Onsen. | Chloride Spring Sodium – chloride spring | — |
| Yamanashi | Chubu | Fujiyama Onsen | Unknown | 62,746/yr |
| Yamanashi | Chubu | Hottarakashi Onsen | Simple Thermal Spring Simple spring | 10,703/yr |
| Yamanashi | Chubu | Yoshinoike Onsen | Simple Thermal Spring Simple spring | 2,399/yr |
| Yamanashi | Chubu | Tsuzumigawa Onsen | Simple Thermal Spring Simple spring | 1,551/yr |
| Yamanashi | Chubu | Hayabusa Onsen | Simple Thermal Spring Simple spring | 1,082/yr |
| Yamanashi | Chubu | Isawa Onsen Sakura Onsenkan Editor's Pick A day-use hot spring facility run by Fuefuki City, using spring water from Isawa Onsen. | Simple Thermal Spring Alkaline simple spring | — |
| Nagano | Chubu | Katakurakan | Unknown | 11,014/yr |
| Nagano | Chubu | Hakuba Happo Onsen | Simple Thermal Spring Alkaline simple spring | 3,097/yr |
| Nagano | Chubu | Azumino Shakunage no Yu | Simple Thermal Spring Simple spring | 2,060/yr |
| Nagano | Chubu | Tatsushima Onsen Seseragi no Yu | Unknown | 1,489/yr |
| Nagano | Chubu | Yurakukan | Unknown | 1,422/yr |
| Nagano | Chubu | Suzumushi-so | Unknown | 1,176/yr |
| Nagano | Chubu | Yu-furu Tanaka | Unknown | 656/yr |
| Nagano | Chubu | Nakano City Toyota Onsen Park Momiji-so | Unknown | 518/yr |
| Nagano | Chubu | Shibu Onsen Oyu Editor's Pick The central communal bathhouse of Shibu Onsen's 'nine-bath pilgrimage,' a symbol of its outdoor-bathhouse culture. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Nagano | Chubu | Shibu Onsen Ichiban-yu Hatsuyu Editor's Pick Regarded as the first bath of the nine-bath pilgrimage, a communal bathhouse. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Nagano | Chubu | Nozawa Onsen Oyu Editor's Pick The central communal bathhouse of Nozawa Onsen's '13 outdoor baths' circuit, a symbol of the town with Edo-period architecture. | Sulfur Spring Simple sulfur spring | — |
| Nagano | Chubu | Nozawa Onsen Asagama-no-yu Editor's Pick A communal bathhouse beside Asagama, the town's source-spring site known for its near-90°C water. | Sulfur Spring Sulfur-bearing sodium/calcium – sulfate spring | — |
| Gifu | Chubu | Gero Onsen Shirasagi no Yu Editor's Pick A town-run communal bathhouse named for the White Heron legend, symbolic of Gero Onsen. | Simple Thermal Spring Alkaline simple spring | 42,197/yr |
| Gifu | Chubu | Nakatsugawa Onsen Kur Resort Yufunesawa | Bicarbonate Spring Sodium bicarbonate spring (baking-soda spring) | 2,320/yr |
| Gifu | Chubu | Shirakawa-go no Yu | Chloride Spring Sodium – chloride mineral spring | 968/yr |
| Shizuoka | Chubu | Yamada-yu Editor's Pick A neighborhood public bathhouse using spring water from Atami Onsen, well loved by locals. | Chloride Spring Sodium – chloride spring | 16,974/yr |
| Shizuoka | Chubu | Marine Spa Atami | Unknown | 2,030/yr |
| Shizuoka | Chubu | Hanasaki no Yu | Unknown | 1,777/yr |
| Shizuoka | Chubu | Fugaku Onsen Hana no Yu | Simple Thermal Spring Simple spring | 1,276/yr |
| Shizuoka | Chubu | Yu Trio | Unknown | 858/yr |
| Shizuoka | Chubu | Itawari no Yu | Chloride Spring Sodium – chloride/bicarbonate spring (hypotonic, alkaline, low-temperature) | 835/yr |
| Shizuoka | Chubu | Shimada City Tashiro no Sato Onsen Itawari no Yu | Unknown | 835/yr |
| Aichi | Chubu | Yukichiro | Simple Thermal Spring Weakly alkaline simple spring | 3,317/yr |
| Aichi | Chubu | Higashiura Hana no Yu | Unknown | 782/yr |
| Aichi | Chubu | Sanage Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in the Sanage Onsen area. | Simple Thermal Spring Simple spring | — |
| Kinki | ||||
| Mie | Kinki | Yuami no Shima | Unknown | 10,538/yr |
| Mie | Kinki | Kuwana Natural Hot Spring | Chloride Spring Sodium – chloride spring | 1,183/yr |
| Mie | Kinki | Yunoyama Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yunoyama Onsen, spread across the foot of Mt. Gozaisho. | Simple Thermal Spring Simple spring | — |
| Shiga | Kinki | Agaryanse | Unknown | 4,518/yr |
| Shiga | Kinki | Katata Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Katata, on the shore of Lake Biwa. | Simple Thermal Spring Simple spring | — |
| Kyoto | Kinki | Kasagi Onsen | Unknown | 15,892/yr |
| Kyoto | Kinki | Refre Kayanosato | Unknown | 1,668/yr |
| Kyoto | Kinki | Kurama Onsen Editor's Pick An open-air day-bathing facility partway up Mt. Kurama, a quiet spring away from central Kyoto. | Simple Thermal Spring Alkaline simple spring | — |
| Osaka | Kinki | Minoh Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in the Minoh Onsen area, known for Minoh Falls. | Simple Thermal Spring Simple spring | — |
| Hyogo | Kinki | Kin no Yu (Gold Bath) Editor's Pick A communal bathhouse run by the city of Kobe. The iconic outer bath of Arima Onsen, where visitors can easily enjoy the reddish-brown 'gold spring' water. | Chloride Spring Iron-bearing sodium – strong chloride spring | 73,619/yr |
| Hyogo | Kinki | Gin no Yu (Silver Bath) Editor's Pick Also run by the city of Kobe, this communal bathhouse offers the clear, colorless 'silver spring' (a carbonated, radium-bearing spring). | Radium Spring Radon spring (carbonated spring) | 73,619/yr |
| Hyogo | Kinki | Taiko no Yu | Unknown | 6,299/yr |
| Hyogo | Kinki | Nature Spa Takarazuka | Unknown | 3,462/yr |
| Hyogo | Kinki | Nada Onsen | Chloride Spring Sodium – bicarbonate/chloride low-temperature spring | 2,015/yr |
| Hyogo | Kinki | Hana no Yu | Radium Spring Simple weakly radioactive cold mineral spring (weakly alkaline, drinkable) | 1,607/yr |
| Hyogo | Kinki | Kitamaekan | Unknown | 980/yr |
| Hyogo | Kinki | Nanakama Onsen Yurakukan | Unknown | 903/yr |
| Hyogo | Kinki | Kato City Takino Exchange & Wellness Center | Chloride Spring Chloride spring (contains calcium, sodium and chloride ions, etc.) | 474/yr |
| Nara | Kinki | Dorogawa Onsen Center Editor's Pick A day-use bathing facility in the Dorogawa Onsen area at the foot of Mt. Omine. | Simple Thermal Spring Simple spring | — |
| Wakayama | Kinki | Saki no Yu Editor's Pick An outer bath of Shirahama Onsen, one of Japan's oldest hot springs, known for its open-air bath overlooking the Pacific Ocean. | Chloride Spring Sodium – chloride spring | 811/yr |
| Chugoku | ||||
| Tottori | Chugoku | Misasa Onsen Kawara-buro Editor's Pick A free open-air bath on the riverbank of the Mitoku River, symbolic of Misasa Onsen, known for having some of the highest radon content in the world. | Radium Spring Radioactive spring (radon spring) | 26,558/yr |
| Tottori | Chugoku | Minato Onsen Honokami | Unknown | 573/yr |
| Tottori | Chugoku | Minato Onsenkan | Unknown | 573/yr |
| Shimane | Chugoku | Izumo Iris no Oka | Unknown | 3,104/yr |
| Shimane | Chugoku | Tamatsukuri Onsen Yu-yu Editor's Pick A town-run day-use hot spring facility in the Tamatsukuri Onsen district. | Chloride Spring Sodium/calcium – sulfate/chloride spring | — |
| Okayama | Chugoku | Sunayu Editor's Pick A free mixed-bathing open-air bath welling up on the riverbank of the Asahi River, one of the finest in western Japan and symbolic of Yubara Onsen. | Simple Thermal Spring Simple spring | 10,837/yr |
| Hiroshima | Chugoku | Miroku no Sato | Unknown | 18,442/yr |
| Hiroshima | Chugoku | Kagura Monzen Tojimura | Unknown | 2,252/yr |
| Hiroshima | Chugoku | Yuki Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yuki Onsen, on the outskirts of Hiroshima city. | Simple Thermal Spring Simple spring | — |
| Yamaguchi | Chugoku | Yuda Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Yuda Onsen, welling up in the center of Yamaguchi City. | Simple Thermal Spring Simple spring | — |
| Shikoku | ||||
| Tokushima | Shikoku | Minami-Awa Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in the Minami-Awa Onsen area of southern Tokushima Prefecture. | Chloride Spring Sodium – chloride spring | — |
| Kagawa | Shikoku | Konpira Onsen Village Day-Bathing Facility Editor's Pick A day-use bathing facility in Konpira Onsen Village, the approach town to Kotohira-gu Shrine. | Chloride Spring Sodium – chloride spring | — |
| Ehime | Shikoku | Dogo Onsen Honkan Editor's Pick The symbolic wooden communal bathhouse of Dogo Onsen, whose history spans 3,000 years and which is associated with Natsume Soseki (an Important Cultural Property of Japan). | Simple Thermal Spring Alkaline simple spring | 14,990/yr |
| Ehime | Shikoku | Kisuke Box | Unknown | 4,687/yr |
| Ehime | Shikoku | Higashi-Dogo Sora to Mori | Simple Thermal Spring Alkaline simple spring | 1,661/yr |
| Ehime | Shikoku | Tsubaki Exchange Hall Tsubaki Onsen Komatsu | Other Hypotonic, weakly alkaline, low-temperature spring | 1,368/yr |
| Ehime | Shikoku | Shimanami Onsen Kisuke no Yu | Other Hypertonic, weakly alkaline, low-temperature spring | 1,301/yr |
| Ehime | Shikoku | Mare Grazia Omishima | Unknown | 1,246/yr |
| Ehime | Shikoku | Riraku | Unknown | 1,201/yr |
| Ehime | Shikoku | Nibukawa Seseragi Exchange Hall | Unknown | 1,140/yr |
| Ehime | Shikoku | Dogo Onsen Annex Asuka no Yuzen Editor's Pick A newer outer bathhouse next to Dogo Onsen Honkan, built with an Asuka-period motif. | Simple Thermal Spring Alkaline simple spring | — |
| Kochi | Shikoku | Yusuhara Onsen Matsurikan Editor's Pick A day-use hot spring facility in Yusuhara Town. | Simple Thermal Spring Simple spring | — |
| Kyushu & Okinawa | ||||
| Fukuoka | Kyushu & Okinawa | Shiraito no Yu | Unknown | 195/yr |
| Fukuoka | Kyushu & Okinawa | Harazuru Onsen Communal Bathhouse Editor's Pick A day-use bathing facility in Harazuru Onsen, spread along the Chikugo River. | Chloride Spring Sodium – chloride spring | — |
| Saga | Kyushu & Okinawa | Siebold no Yu Editor's Pick The symbolic town-run communal bathhouse of Ureshino Onsen, known for its silky 'beautiful-skin' water. | Simple Thermal Spring Alkaline simple spring | 17,775/yr |
| Saga | Kyushu & Okinawa | Takeo Onsen Shinkan | Unknown | 1,959/yr |
| Nagasaki | Kyushu & Okinawa | Iimori Tsuki no Oka Onsen | Unknown | 764/yr |
| Nagasaki | Kyushu & Okinawa | Kojigoku Onsenkan Editor's Pick A day-use bathing facility near Unzen Jigoku, known for its milky-white sulfur spring. | Sulfur Spring Acidic sulfur spring | — |
| Kumamoto | Kyushu & Okinawa | Yurakkusu | Unknown | 2,946/yr |
| Kumamoto | Kyushu & Okinawa | Sakura-yu | Unknown | 2,052/yr |
| Kumamoto | Kyushu & Okinawa | Kurokawa Onsen Ikoi no Ie Editor's Pick A town-run day-use bathing facility in Kurokawa Onsen. | Simple Thermal Spring Simple spring | — |
| Oita | Kyushu & Okinawa | Keirin Onsen | Unknown | 5,451/yr |
| Oita | Kyushu & Okinawa | Takegawara Onsen Editor's Pick Founded in 1879, the city-run communal bathhouse representative of Beppu Onsen, also famous for its sand-bath treatments. | Unknown | 5,063/yr |
| Oita | Kyushu & Okinawa | Hamawaki Onsen | Unknown | 2,217/yr |
| Oita | Kyushu & Okinawa | Beppu Kaihin Sunayu (Beach Sand Bath) | Unknown | 2,112/yr |
| Oita | Kyushu & Okinawa | Hyotan Onsen | Unknown | 1,681/yr |
| Oita | Kyushu & Okinawa | Kannawa Mushiyu (Steam Bath) | Unknown | 1,604/yr |
| Oita | Kyushu & Okinawa | Furo-sen | Unknown | 1,539/yr |
| Oita | Kyushu & Okinawa | Kusu Onsen | Unknown | 972/yr |
| Miyazaki | Kyushu & Okinawa | Ebino Kogen Onsen Communal Bathhouse Editor's Pick A day-use bathing facility on the Ebino Plateau in the Kirishima mountain range. | Unknown | — |
| Kagoshima | Kyushu & Okinawa | Sunamushi Kaikan Sarakku Editor's Pick A facility symbolic of Ibusuki Onsen, offering the rare natural sand-steam bath experience found almost nowhere else in the world. | Chloride Spring Sodium – chloride spring | 10,406/yr |
| Okinawa | Kyushu & Okinawa | Natural Hot Spring Aroma | Other Iodine-bearing salt spring | 937/yr |
| Okinawa | Kyushu & Okinawa | Yuinchi Nanjo Onsen Day-Bathing Facility Editor's Pick A day-use bathing facility in Nanjo City, Okinawa Prefecture. | Chloride Spring Sodium – strong chloride spring | — |